Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Gm23935-201ENSMUST00000102303 57 ntBASIC17.04■□□□□ 0.32
Smarcal1Q8BJL0 Gm24270-201ENSMUST00000102326 57 ntBASIC17.04■□□□□ 0.32
Smarcal1Q8BJL0 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.04■□□□□ 0.32
Smarcal1Q8BJL0 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcal1Q8BJL0 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.04■□□□□ 0.32
Smarcal1Q8BJL0 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcal1Q8BJL0 Gm8344-201ENSMUST00000119813 856 ntBASIC17.04■□□□□ 0.32
Smarcal1Q8BJL0 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.04■□□□□ 0.32
Smarcal1Q8BJL0 Gm24245-201ENSMUST00000157318 57 ntBASIC17.04■□□□□ 0.32
Smarcal1Q8BJL0 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.04■□□□□ 0.32
Smarcal1Q8BJL0 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcal1Q8BJL0 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.04■□□□□ 0.32
Smarcal1Q8BJL0 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcal1Q8BJL0 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcal1Q8BJL0 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcal1Q8BJL0 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcal1Q8BJL0 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcal1Q8BJL0 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcal1Q8BJL0 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Smarcal1Q8BJL0 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Smarcal1Q8BJL0 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.03■□□□□ 0.32
Smarcal1Q8BJL0 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcal1Q8BJL0 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Smarcal1Q8BJL0 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Smarcal1Q8BJL0 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcal1Q8BJL0 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcal1Q8BJL0 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Smarcal1Q8BJL0 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcal1Q8BJL0 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Smarcal1Q8BJL0 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcal1Q8BJL0 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcal1Q8BJL0 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcal1Q8BJL0 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcal1Q8BJL0 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC17.03■□□□□ 0.32
Smarcal1Q8BJL0 Gm10175-201ENSMUST00000086013 645 ntBASIC17.03■□□□□ 0.32
Smarcal1Q8BJL0 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Smarcal1Q8BJL0 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcal1Q8BJL0 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcal1Q8BJL0 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcal1Q8BJL0 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcal1Q8BJL0 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcal1Q8BJL0 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcal1Q8BJL0 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcal1Q8BJL0 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcal1Q8BJL0 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcal1Q8BJL0 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcal1Q8BJL0 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcal1Q8BJL0 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Smarcal1Q8BJL0 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcal1Q8BJL0 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcal1Q8BJL0 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcal1Q8BJL0 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.02■□□□□ 0.32
Smarcal1Q8BJL0 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcal1Q8BJL0 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcal1Q8BJL0 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Smarcal1Q8BJL0 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC17.02■□□□□ 0.32
Smarcal1Q8BJL0 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcal1Q8BJL0 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcal1Q8BJL0 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Smarcal1Q8BJL0 Gm5682-201ENSMUST00000173402 505 ntBASIC17.02■□□□□ 0.32
Smarcal1Q8BJL0 Mir3113-201ENSMUST00000175478 76 ntBASIC17.02■□□□□ 0.32
Smarcal1Q8BJL0 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcal1Q8BJL0 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.02■□□□□ 0.32
Smarcal1Q8BJL0 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Smarcal1Q8BJL0 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcal1Q8BJL0 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcal1Q8BJL0 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcal1Q8BJL0 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smarcal1Q8BJL0 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smarcal1Q8BJL0 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smarcal1Q8BJL0 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smarcal1Q8BJL0 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcal1Q8BJL0 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcal1Q8BJL0 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcal1Q8BJL0 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcal1Q8BJL0 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcal1Q8BJL0 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.01■□□□□ 0.31
Smarcal1Q8BJL0 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Smarcal1Q8BJL0 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcal1Q8BJL0 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Smarcal1Q8BJL0 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.01■□□□□ 0.31
Smarcal1Q8BJL0 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC17.01■□□□□ 0.31
Smarcal1Q8BJL0 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcal1Q8BJL0 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcal1Q8BJL0 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcal1Q8BJL0 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcal1Q8BJL0 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcal1Q8BJL0 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.01■□□□□ 0.31
Smarcal1Q8BJL0 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcal1Q8BJL0 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcal1Q8BJL0 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Smarcal1Q8BJL0 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17■□□□□ 0.31
Smarcal1Q8BJL0 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17■□□□□ 0.31
Smarcal1Q8BJL0 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17■□□□□ 0.31
Smarcal1Q8BJL0 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17■□□□□ 0.31
Smarcal1Q8BJL0 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Smarcal1Q8BJL0 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17■□□□□ 0.31
Smarcal1Q8BJL0 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcal1Q8BJL0 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17■□□□□ 0.31
Smarcal1Q8BJL0 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms