Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp2bQ8BJF9 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp2bQ8BJF9 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Chmp2bQ8BJF9 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp2bQ8BJF9 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp2bQ8BJF9 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp2bQ8BJF9 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp2bQ8BJF9 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp2bQ8BJF9 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.46■□□□□ 0.23
Chmp2bQ8BJF9 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp2bQ8BJF9 Gm2274-201ENSMUST00000184539 609 ntBASIC16.46■□□□□ 0.23
Chmp2bQ8BJF9 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp2bQ8BJF9 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp2bQ8BJF9 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp2bQ8BJF9 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp2bQ8BJF9 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp2bQ8BJF9 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Chmp2bQ8BJF9 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp2bQ8BJF9 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp2bQ8BJF9 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp2bQ8BJF9 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
Chmp2bQ8BJF9 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Chmp2bQ8BJF9 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Chmp2bQ8BJF9 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp2bQ8BJF9 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp2bQ8BJF9 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.45■□□□□ 0.22
Chmp2bQ8BJF9 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp2bQ8BJF9 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp2bQ8BJF9 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp2bQ8BJF9 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp2bQ8BJF9 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp2bQ8BJF9 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.45■□□□□ 0.22
Chmp2bQ8BJF9 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp2bQ8BJF9 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp2bQ8BJF9 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
Chmp2bQ8BJF9 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp2bQ8BJF9 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Chmp2bQ8BJF9 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Chmp2bQ8BJF9 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp2bQ8BJF9 Gm11336-201ENSMUST00000118168 334 ntBASIC16.45■□□□□ 0.22
Chmp2bQ8BJF9 Gm16061-201ENSMUST00000122167 857 ntBASIC16.45■□□□□ 0.22
Chmp2bQ8BJF9 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp2bQ8BJF9 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp2bQ8BJF9 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp2bQ8BJF9 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp2bQ8BJF9 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp2bQ8BJF9 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp2bQ8BJF9 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Chmp2bQ8BJF9 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp2bQ8BJF9 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp2bQ8BJF9 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp2bQ8BJF9 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp2bQ8BJF9 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp2bQ8BJF9 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp2bQ8BJF9 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp2bQ8BJF9 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp2bQ8BJF9 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp2bQ8BJF9 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp2bQ8BJF9 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp2bQ8BJF9 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.44■□□□□ 0.22
Chmp2bQ8BJF9 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp2bQ8BJF9 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp2bQ8BJF9 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.44■□□□□ 0.22
Chmp2bQ8BJF9 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.44■□□□□ 0.22
Chmp2bQ8BJF9 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.44■□□□□ 0.22
Chmp2bQ8BJF9 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.44■□□□□ 0.22
Chmp2bQ8BJF9 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp2bQ8BJF9 Gm36967-201ENSMUST00000193814 266 ntBASIC16.44■□□□□ 0.22
Chmp2bQ8BJF9 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.44■□□□□ 0.22
Chmp2bQ8BJF9 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.44■□□□□ 0.22
Chmp2bQ8BJF9 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp2bQ8BJF9 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Chmp2bQ8BJF9 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
Chmp2bQ8BJF9 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Chmp2bQ8BJF9 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp2bQ8BJF9 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Chmp2bQ8BJF9 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp2bQ8BJF9 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp2bQ8BJF9 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp2bQ8BJF9 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Chmp2bQ8BJF9 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp2bQ8BJF9 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp2bQ8BJF9 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp2bQ8BJF9 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp2bQ8BJF9 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp2bQ8BJF9 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp2bQ8BJF9 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp2bQ8BJF9 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp2bQ8BJF9 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp2bQ8BJF9 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp2bQ8BJF9 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp2bQ8BJF9 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp2bQ8BJF9 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp2bQ8BJF9 Gm13474-201ENSMUST00000122466 815 ntBASIC16.43■□□□□ 0.22
Chmp2bQ8BJF9 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp2bQ8BJF9 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp2bQ8BJF9 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.43■□□□□ 0.22
Chmp2bQ8BJF9 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp2bQ8BJF9 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp2bQ8BJF9 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms