Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ubp1Q811S7 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ubp1Q811S7 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ubp1Q811S7 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.81■□□□□ 0.12
Ubp1Q811S7 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ubp1Q811S7 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Ubp1Q811S7 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ubp1Q811S7 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ubp1Q811S7 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ubp1Q811S7 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Ubp1Q811S7 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ubp1Q811S7 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ubp1Q811S7 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ubp1Q811S7 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.81■□□□□ 0.12
Ubp1Q811S7 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.81■□□□□ 0.12
Ubp1Q811S7 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ubp1Q811S7 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ubp1Q811S7 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.81■□□□□ 0.12
Ubp1Q811S7 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Ubp1Q811S7 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ubp1Q811S7 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.81■□□□□ 0.12
Ubp1Q811S7 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ubp1Q811S7 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ubp1Q811S7 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ubp1Q811S7 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ubp1Q811S7 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ubp1Q811S7 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ubp1Q811S7 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ubp1Q811S7 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ubp1Q811S7 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ubp1Q811S7 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ubp1Q811S7 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ubp1Q811S7 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Ubp1Q811S7 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Ubp1Q811S7 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Ubp1Q811S7 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ubp1Q811S7 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ubp1Q811S7 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Ubp1Q811S7 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ubp1Q811S7 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.8■□□□□ 0.12
Ubp1Q811S7 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ubp1Q811S7 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ubp1Q811S7 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ubp1Q811S7 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ubp1Q811S7 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ubp1Q811S7 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.8■□□□□ 0.12
Ubp1Q811S7 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ubp1Q811S7 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ubp1Q811S7 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ubp1Q811S7 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.8■□□□□ 0.12
Ubp1Q811S7 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.8■□□□□ 0.12
Ubp1Q811S7 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.8■□□□□ 0.12
Ubp1Q811S7 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ubp1Q811S7 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Ubp1Q811S7 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ubp1Q811S7 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ubp1Q811S7 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ubp1Q811S7 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ubp1Q811S7 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ubp1Q811S7 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Ubp1Q811S7 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ubp1Q811S7 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ubp1Q811S7 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ubp1Q811S7 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ubp1Q811S7 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ubp1Q811S7 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.79■□□□□ 0.12
Ubp1Q811S7 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ubp1Q811S7 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
Ubp1Q811S7 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Ubp1Q811S7 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ubp1Q811S7 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ubp1Q811S7 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ubp1Q811S7 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.79■□□□□ 0.12
Ubp1Q811S7 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ubp1Q811S7 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.79■□□□□ 0.12
Ubp1Q811S7 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ubp1Q811S7 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.79■□□□□ 0.12
Ubp1Q811S7 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Ubp1Q811S7 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ubp1Q811S7 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ubp1Q811S7 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ubp1Q811S7 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ubp1Q811S7 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ubp1Q811S7 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ubp1Q811S7 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Ubp1Q811S7 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Ubp1Q811S7 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ubp1Q811S7 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ubp1Q811S7 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ubp1Q811S7 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ubp1Q811S7 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubp1Q811S7 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Ubp1Q811S7 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubp1Q811S7 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.78■□□□□ 0.12
Ubp1Q811S7 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ubp1Q811S7 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubp1Q811S7 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Ubp1Q811S7 Gm27357-201ENSMUST00000183754 135 ntBASIC15.78■□□□□ 0.12
Ubp1Q811S7 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Ubp1Q811S7 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms