Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm8Q6ZWM4 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm8Q6ZWM4 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Lsm8Q6ZWM4 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm8Q6ZWM4 Dancr-204ENSMUST00000132389 2347 ntBASIC16.84■□□□□ 0.29
Lsm8Q6ZWM4 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Lsm8Q6ZWM4 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Lsm8Q6ZWM4 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm8Q6ZWM4 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.83■□□□□ 0.28
Lsm8Q6ZWM4 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.83■□□□□ 0.28
Lsm8Q6ZWM4 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm8Q6ZWM4 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.83■□□□□ 0.28
Lsm8Q6ZWM4 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.83■□□□□ 0.28
Lsm8Q6ZWM4 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.83■□□□□ 0.28
Lsm8Q6ZWM4 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm8Q6ZWM4 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.83■□□□□ 0.28
Lsm8Q6ZWM4 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm8Q6ZWM4 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm8Q6ZWM4 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm8Q6ZWM4 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm8Q6ZWM4 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm8Q6ZWM4 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Lsm8Q6ZWM4 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm8Q6ZWM4 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm8Q6ZWM4 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm8Q6ZWM4 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm8Q6ZWM4 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm8Q6ZWM4 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm8Q6ZWM4 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm8Q6ZWM4 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm8Q6ZWM4 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm8Q6ZWM4 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Lsm8Q6ZWM4 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm8Q6ZWM4 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.82■□□□□ 0.28
Lsm8Q6ZWM4 Gm7284-201ENSMUST00000131667 944 ntBASIC16.82■□□□□ 0.28
Lsm8Q6ZWM4 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Lsm8Q6ZWM4 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm8Q6ZWM4 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.82■□□□□ 0.28
Lsm8Q6ZWM4 Gm7977-201ENSMUST00000193787 748 ntBASIC16.82■□□□□ 0.28
Lsm8Q6ZWM4 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.82■□□□□ 0.28
Lsm8Q6ZWM4 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm8Q6ZWM4 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm8Q6ZWM4 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm8Q6ZWM4 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm8Q6ZWM4 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm8Q6ZWM4 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Lsm8Q6ZWM4 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm8Q6ZWM4 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm8Q6ZWM4 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.82■□□□□ 0.28
Lsm8Q6ZWM4 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Lsm8Q6ZWM4 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm8Q6ZWM4 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Lsm8Q6ZWM4 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm8Q6ZWM4 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.81■□□□□ 0.28
Lsm8Q6ZWM4 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm8Q6ZWM4 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm8Q6ZWM4 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm8Q6ZWM4 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.81■□□□□ 0.28
Lsm8Q6ZWM4 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.81■□□□□ 0.28
Lsm8Q6ZWM4 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm8Q6ZWM4 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm8Q6ZWM4 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.81■□□□□ 0.28
Lsm8Q6ZWM4 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Lsm8Q6ZWM4 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm8Q6ZWM4 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm8Q6ZWM4 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
Lsm8Q6ZWM4 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm8Q6ZWM4 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm8Q6ZWM4 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm8Q6ZWM4 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm8Q6ZWM4 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Lsm8Q6ZWM4 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm8Q6ZWM4 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm8Q6ZWM4 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm8Q6ZWM4 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm8Q6ZWM4 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Lsm8Q6ZWM4 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.8■□□□□ 0.28
Lsm8Q6ZWM4 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.8■□□□□ 0.28
Lsm8Q6ZWM4 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm8Q6ZWM4 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm8Q6ZWM4 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm8Q6ZWM4 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm8Q6ZWM4 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm8Q6ZWM4 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm8Q6ZWM4 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm8Q6ZWM4 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm8Q6ZWM4 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm8Q6ZWM4 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.8■□□□□ 0.28
Lsm8Q6ZWM4 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.8■□□□□ 0.28
Lsm8Q6ZWM4 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm8Q6ZWM4 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm8Q6ZWM4 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm8Q6ZWM4 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm8Q6ZWM4 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Lsm8Q6ZWM4 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm8Q6ZWM4 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm8Q6ZWM4 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm8Q6ZWM4 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm8Q6ZWM4 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm8Q6ZWM4 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms