Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Npc1l1Q6T3U4 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Npc1l1Q6T3U4 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Npc1l1Q6T3U4 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC19.19■□□□□ 0.66
Npc1l1Q6T3U4 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Npc1l1Q6T3U4 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC19.19■□□□□ 0.66
Npc1l1Q6T3U4 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC19.19■□□□□ 0.66
Npc1l1Q6T3U4 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Npc1l1Q6T3U4 Rbfox2-206ENSMUST00000227314 1810 ntBASIC19.19■□□□□ 0.66
Npc1l1Q6T3U4 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
Npc1l1Q6T3U4 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Npc1l1Q6T3U4 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Npc1l1Q6T3U4 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Npc1l1Q6T3U4 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Npc1l1Q6T3U4 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Npc1l1Q6T3U4 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Npc1l1Q6T3U4 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Npc1l1Q6T3U4 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Npc1l1Q6T3U4 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC19.18■□□□□ 0.66
Npc1l1Q6T3U4 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Npc1l1Q6T3U4 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Npc1l1Q6T3U4 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Npc1l1Q6T3U4 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Npc1l1Q6T3U4 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Npc1l1Q6T3U4 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Npc1l1Q6T3U4 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Npc1l1Q6T3U4 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Npc1l1Q6T3U4 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Npc1l1Q6T3U4 Gm25990-201ENSMUST00000102440 86 ntBASIC19.18■□□□□ 0.66
Npc1l1Q6T3U4 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Npc1l1Q6T3U4 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Npc1l1Q6T3U4 Gm11779-201ENSMUST00000118541 368 ntBASIC19.18■□□□□ 0.66
Npc1l1Q6T3U4 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Npc1l1Q6T3U4 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Npc1l1Q6T3U4 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Npc1l1Q6T3U4 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Npc1l1Q6T3U4 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC19.18■□□□□ 0.66
Npc1l1Q6T3U4 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Npc1l1Q6T3U4 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Npc1l1Q6T3U4 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Npc1l1Q6T3U4 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Npc1l1Q6T3U4 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Npc1l1Q6T3U4 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Npc1l1Q6T3U4 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Npc1l1Q6T3U4 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Npc1l1Q6T3U4 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Npc1l1Q6T3U4 Gm4459-201ENSMUST00000118750 468 ntBASIC19.17■□□□□ 0.66
Npc1l1Q6T3U4 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC19.17■□□□□ 0.66
Npc1l1Q6T3U4 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC19.17■□□□□ 0.66
Npc1l1Q6T3U4 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Npc1l1Q6T3U4 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Npc1l1Q6T3U4 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC19.17■□□□□ 0.66
Npc1l1Q6T3U4 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Npc1l1Q6T3U4 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Npc1l1Q6T3U4 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Npc1l1Q6T3U4 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Npc1l1Q6T3U4 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Npc1l1Q6T3U4 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Npc1l1Q6T3U4 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Npc1l1Q6T3U4 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Npc1l1Q6T3U4 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Npc1l1Q6T3U4 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Npc1l1Q6T3U4 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Npc1l1Q6T3U4 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Npc1l1Q6T3U4 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Npc1l1Q6T3U4 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Npc1l1Q6T3U4 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC19.16■□□□□ 0.66
Npc1l1Q6T3U4 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC19.16■□□□□ 0.66
Npc1l1Q6T3U4 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC19.16■□□□□ 0.66
Npc1l1Q6T3U4 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Npc1l1Q6T3U4 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC19.16■□□□□ 0.66
Npc1l1Q6T3U4 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC19.16■□□□□ 0.66
Npc1l1Q6T3U4 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Npc1l1Q6T3U4 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC19.16■□□□□ 0.66
Npc1l1Q6T3U4 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Npc1l1Q6T3U4 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Npc1l1Q6T3U4 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Npc1l1Q6T3U4 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Npc1l1Q6T3U4 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Npc1l1Q6T3U4 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Npc1l1Q6T3U4 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Npc1l1Q6T3U4 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Npc1l1Q6T3U4 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Npc1l1Q6T3U4 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Npc1l1Q6T3U4 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Npc1l1Q6T3U4 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Npc1l1Q6T3U4 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Npc1l1Q6T3U4 Gm15173-201ENSMUST00000122049 433 ntBASIC19.15■□□□□ 0.66
Npc1l1Q6T3U4 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Npc1l1Q6T3U4 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC19.15■□□□□ 0.66
Npc1l1Q6T3U4 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Npc1l1Q6T3U4 Gm7230-201ENSMUST00000173026 815 ntBASIC19.15■□□□□ 0.66
Npc1l1Q6T3U4 Gm5264-201ENSMUST00000190584 848 ntBASIC19.15■□□□□ 0.66
Npc1l1Q6T3U4 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC19.15■□□□□ 0.66
Npc1l1Q6T3U4 AC159093.1-201ENSMUST00000227779 380 ntBASIC19.15■□□□□ 0.66
Npc1l1Q6T3U4 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Npc1l1Q6T3U4 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Npc1l1Q6T3U4 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Npc1l1Q6T3U4 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Npc1l1Q6T3U4 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms