Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm15500-202ENSMUST00000071641 1019 ntBASIC18.79■□□□□ 0.6
Nup98Q6PFD9 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Nup98Q6PFD9 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Nup98Q6PFD9 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nup98Q6PFD9 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nup98Q6PFD9 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nup98Q6PFD9 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC18.79■□□□□ 0.6
Nup98Q6PFD9 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nup98Q6PFD9 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nup98Q6PFD9 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
Nup98Q6PFD9 AC159295.1-201ENSMUST00000225326 940 ntBASIC18.79■□□□□ 0.6
Nup98Q6PFD9 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nup98Q6PFD9 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nup98Q6PFD9 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nup98Q6PFD9 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nup98Q6PFD9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nup98Q6PFD9 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nup98Q6PFD9 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nup98Q6PFD9 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Nup98Q6PFD9 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nup98Q6PFD9 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nup98Q6PFD9 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nup98Q6PFD9 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nup98Q6PFD9 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC18.78■□□□□ 0.6
Nup98Q6PFD9 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nup98Q6PFD9 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nup98Q6PFD9 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.78■□□□□ 0.6
Nup98Q6PFD9 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nup98Q6PFD9 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nup98Q6PFD9 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nup98Q6PFD9 Prkcz2-201ENSMUST00000206136 1756 ntBASIC18.77■□□□□ 0.6
Nup98Q6PFD9 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nup98Q6PFD9 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC18.77■□□□□ 0.6
Nup98Q6PFD9 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Nup98Q6PFD9 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.77■□□□□ 0.6
Nup98Q6PFD9 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nup98Q6PFD9 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Nup98Q6PFD9 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC18.77■□□□□ 0.6
Nup98Q6PFD9 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nup98Q6PFD9 Gm4913-201ENSMUST00000117075 1290 ntBASIC18.77■□□□□ 0.6
Nup98Q6PFD9 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC18.77■□□□□ 0.6
Nup98Q6PFD9 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Nup98Q6PFD9 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC18.77■□□□□ 0.6
Nup98Q6PFD9 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nup98Q6PFD9 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nup98Q6PFD9 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nup98Q6PFD9 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nup98Q6PFD9 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nup98Q6PFD9 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nup98Q6PFD9 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nup98Q6PFD9 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nup98Q6PFD9 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nup98Q6PFD9 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nup98Q6PFD9 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nup98Q6PFD9 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Nup98Q6PFD9 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC18.77■□□□□ 0.59
Nup98Q6PFD9 AC151286.1-201ENSMUST00000198489 145 ntBASIC18.77■□□□□ 0.59
Nup98Q6PFD9 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC18.77■□□□□ 0.59
Nup98Q6PFD9 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.59
Nup98Q6PFD9 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Nup98Q6PFD9 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.76■□□□□ 0.59
Nup98Q6PFD9 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nup98Q6PFD9 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nup98Q6PFD9 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nup98Q6PFD9 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.76■□□□□ 0.59
Nup98Q6PFD9 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nup98Q6PFD9 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nup98Q6PFD9 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nup98Q6PFD9 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Nup98Q6PFD9 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nup98Q6PFD9 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nup98Q6PFD9 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Nup98Q6PFD9 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
Nup98Q6PFD9 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nup98Q6PFD9 Gm44492-201ENSMUST00000197012 141 ntBASIC18.76■□□□□ 0.59
Nup98Q6PFD9 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC18.76■□□□□ 0.59
Nup98Q6PFD9 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nup98Q6PFD9 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nup98Q6PFD9 Gm12892-201ENSMUST00000117367 1146 ntBASIC18.75■□□□□ 0.59
Nup98Q6PFD9 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC18.75■□□□□ 0.59
Nup98Q6PFD9 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Nup98Q6PFD9 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nup98Q6PFD9 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nup98Q6PFD9 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nup98Q6PFD9 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Nup98Q6PFD9 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nup98Q6PFD9 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup98Q6PFD9 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC18.74■□□□□ 0.59
Nup98Q6PFD9 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup98Q6PFD9 Gm45747-201ENSMUST00000212203 999 ntBASIC18.74■□□□□ 0.59
Nup98Q6PFD9 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Nup98Q6PFD9 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nup98Q6PFD9 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup98Q6PFD9 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nup98Q6PFD9 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nup98Q6PFD9 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup98Q6PFD9 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup98Q6PFD9 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup98Q6PFD9 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup98Q6PFD9 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms