Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scube3Q66PY1 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Scube3Q66PY1 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scube3Q66PY1 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scube3Q66PY1 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scube3Q66PY1 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scube3Q66PY1 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.83■□□□□ 0.28
Scube3Q66PY1 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scube3Q66PY1 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scube3Q66PY1 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scube3Q66PY1 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Scube3Q66PY1 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.82■□□□□ 0.28
Scube3Q66PY1 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.82■□□□□ 0.28
Scube3Q66PY1 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Scube3Q66PY1 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Scube3Q66PY1 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Scube3Q66PY1 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scube3Q66PY1 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scube3Q66PY1 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scube3Q66PY1 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scube3Q66PY1 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Scube3Q66PY1 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scube3Q66PY1 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.82■□□□□ 0.28
Scube3Q66PY1 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.82■□□□□ 0.28
Scube3Q66PY1 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scube3Q66PY1 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.82■□□□□ 0.28
Scube3Q66PY1 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scube3Q66PY1 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.82■□□□□ 0.28
Scube3Q66PY1 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scube3Q66PY1 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.82■□□□□ 0.28
Scube3Q66PY1 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scube3Q66PY1 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Scube3Q66PY1 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scube3Q66PY1 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Scube3Q66PY1 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scube3Q66PY1 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Scube3Q66PY1 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scube3Q66PY1 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scube3Q66PY1 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scube3Q66PY1 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.82■□□□□ 0.28
Scube3Q66PY1 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Scube3Q66PY1 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.81■□□□□ 0.28
Scube3Q66PY1 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scube3Q66PY1 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scube3Q66PY1 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scube3Q66PY1 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scube3Q66PY1 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scube3Q66PY1 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Scube3Q66PY1 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scube3Q66PY1 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Scube3Q66PY1 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scube3Q66PY1 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scube3Q66PY1 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Scube3Q66PY1 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.81■□□□□ 0.28
Scube3Q66PY1 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scube3Q66PY1 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scube3Q66PY1 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scube3Q66PY1 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.81■□□□□ 0.28
Scube3Q66PY1 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scube3Q66PY1 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scube3Q66PY1 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.81■□□□□ 0.28
Scube3Q66PY1 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.81■□□□□ 0.28
Scube3Q66PY1 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scube3Q66PY1 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Scube3Q66PY1 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scube3Q66PY1 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scube3Q66PY1 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scube3Q66PY1 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Scube3Q66PY1 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scube3Q66PY1 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scube3Q66PY1 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.8■□□□□ 0.28
Scube3Q66PY1 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scube3Q66PY1 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scube3Q66PY1 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Scube3Q66PY1 Gm7153-201ENSMUST00000117092 455 ntBASIC16.8■□□□□ 0.28
Scube3Q66PY1 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.8■□□□□ 0.28
Scube3Q66PY1 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Scube3Q66PY1 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Scube3Q66PY1 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scube3Q66PY1 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scube3Q66PY1 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Scube3Q66PY1 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Scube3Q66PY1 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scube3Q66PY1 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scube3Q66PY1 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scube3Q66PY1 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scube3Q66PY1 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.8■□□□□ 0.28
Scube3Q66PY1 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scube3Q66PY1 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scube3Q66PY1 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Scube3Q66PY1 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scube3Q66PY1 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.79■□□□□ 0.28
Scube3Q66PY1 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scube3Q66PY1 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Scube3Q66PY1 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scube3Q66PY1 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scube3Q66PY1 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scube3Q66PY1 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scube3Q66PY1 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Scube3Q66PY1 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms