Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Six2Q62232 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Six2Q62232 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Six2Q62232 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.1■□□□□ 0.33
Six2Q62232 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Six2Q62232 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Six2Q62232 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Six2Q62232 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Six2Q62232 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.1■□□□□ 0.33
Six2Q62232 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Six2Q62232 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Six2Q62232 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.1■□□□□ 0.33
Six2Q62232 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.1■□□□□ 0.33
Six2Q62232 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Six2Q62232 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Six2Q62232 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Six2Q62232 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
Six2Q62232 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Six2Q62232 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Six2Q62232 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Six2Q62232 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Six2Q62232 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Six2Q62232 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Six2Q62232 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Six2Q62232 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Six2Q62232 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Six2Q62232 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Six2Q62232 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Six2Q62232 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Six2Q62232 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Six2Q62232 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Six2Q62232 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Six2Q62232 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Six2Q62232 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Six2Q62232 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Six2Q62232 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Six2Q62232 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Six2Q62232 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Six2Q62232 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Six2Q62232 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC17.09■□□□□ 0.33
Six2Q62232 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Six2Q62232 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Six2Q62232 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Six2Q62232 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.09■□□□□ 0.33
Six2Q62232 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Six2Q62232 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Six2Q62232 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Six2Q62232 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Six2Q62232 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Six2Q62232 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Six2Q62232 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Six2Q62232 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Six2Q62232 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Six2Q62232 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Six2Q62232 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Six2Q62232 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Six2Q62232 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Six2Q62232 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Six2Q62232 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.08■□□□□ 0.32
Six2Q62232 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Six2Q62232 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.08■□□□□ 0.32
Six2Q62232 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.08■□□□□ 0.32
Six2Q62232 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.08■□□□□ 0.32
Six2Q62232 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.08■□□□□ 0.32
Six2Q62232 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Six2Q62232 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Six2Q62232 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Six2Q62232 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Six2Q62232 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Six2Q62232 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.32
Six2Q62232 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Six2Q62232 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Six2Q62232 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Six2Q62232 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Six2Q62232 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Six2Q62232 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Six2Q62232 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Six2Q62232 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Six2Q62232 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Six2Q62232 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Six2Q62232 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.07■□□□□ 0.32
Six2Q62232 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.07■□□□□ 0.32
Six2Q62232 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Six2Q62232 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Six2Q62232 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Six2Q62232 Gm13312-201ENSMUST00000119631 718 ntBASIC17.07■□□□□ 0.32
Six2Q62232 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Six2Q62232 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.07■□□□□ 0.32
Six2Q62232 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.07■□□□□ 0.32
Six2Q62232 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Six2Q62232 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Six2Q62232 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Six2Q62232 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Six2Q62232 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Six2Q62232 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Six2Q62232 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Six2Q62232 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.07■□□□□ 0.32
Six2Q62232 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Six2Q62232 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Six2Q62232 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms