Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcd1Q61466 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcd1Q61466 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcd1Q61466 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcd1Q61466 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Smarcd1Q61466 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcd1Q61466 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcd1Q61466 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Smarcd1Q61466 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcd1Q61466 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcd1Q61466 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcd1Q61466 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcd1Q61466 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcd1Q61466 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.68■□□□□ 0.26
Smarcd1Q61466 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcd1Q61466 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcd1Q61466 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
Smarcd1Q61466 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.68■□□□□ 0.26
Smarcd1Q61466 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.68■□□□□ 0.26
Smarcd1Q61466 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.68■□□□□ 0.26
Smarcd1Q61466 Gm6296-201ENSMUST00000222599 943 ntBASIC16.68■□□□□ 0.26
Smarcd1Q61466 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcd1Q61466 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcd1Q61466 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcd1Q61466 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Smarcd1Q61466 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Smarcd1Q61466 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcd1Q61466 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcd1Q61466 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcd1Q61466 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcd1Q61466 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcd1Q61466 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcd1Q61466 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Smarcd1Q61466 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.67■□□□□ 0.26
Smarcd1Q61466 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcd1Q61466 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcd1Q61466 Gm8097-201ENSMUST00000117903 829 ntBASIC16.67■□□□□ 0.26
Smarcd1Q61466 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcd1Q61466 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.67■□□□□ 0.26
Smarcd1Q61466 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.67■□□□□ 0.26
Smarcd1Q61466 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcd1Q61466 Mzt1-203ENSMUST00000227948 952 ntBASIC16.67■□□□□ 0.26
Smarcd1Q61466 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcd1Q61466 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcd1Q61466 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcd1Q61466 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcd1Q61466 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcd1Q61466 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
Smarcd1Q61466 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Smarcd1Q61466 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcd1Q61466 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcd1Q61466 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcd1Q61466 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Smarcd1Q61466 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.66■□□□□ 0.26
Smarcd1Q61466 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcd1Q61466 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcd1Q61466 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcd1Q61466 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.66■□□□□ 0.26
Smarcd1Q61466 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcd1Q61466 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcd1Q61466 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcd1Q61466 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcd1Q61466 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcd1Q61466 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcd1Q61466 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Smarcd1Q61466 Gm4535-201ENSMUST00000182274 558 ntBASIC16.66■□□□□ 0.26
Smarcd1Q61466 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcd1Q61466 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcd1Q61466 Gm8655-201ENSMUST00000221159 852 ntBASIC16.66■□□□□ 0.26
Smarcd1Q61466 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcd1Q61466 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcd1Q61466 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcd1Q61466 Gm10355-201ENSMUST00000097146 517 ntBASIC16.66■□□□□ 0.26
Smarcd1Q61466 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcd1Q61466 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
Smarcd1Q61466 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcd1Q61466 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcd1Q61466 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Smarcd1Q61466 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.65■□□□□ 0.26
Smarcd1Q61466 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcd1Q61466 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcd1Q61466 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcd1Q61466 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcd1Q61466 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Smarcd1Q61466 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcd1Q61466 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.65■□□□□ 0.26
Smarcd1Q61466 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcd1Q61466 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.65■□□□□ 0.26
Smarcd1Q61466 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcd1Q61466 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Smarcd1Q61466 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcd1Q61466 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcd1Q61466 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcd1Q61466 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.65■□□□□ 0.26
Smarcd1Q61466 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcd1Q61466 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcd1Q61466 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Smarcd1Q61466 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.65■□□□□ 0.26
Smarcd1Q61466 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Smarcd1Q61466 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms