Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ptch1Q61115 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC23.02■■□□□ 1.28
Ptch1Q61115 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ptch1Q61115 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ptch1Q61115 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC23.02■■□□□ 1.28
Ptch1Q61115 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ptch1Q61115 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ptch1Q61115 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Ptch1Q61115 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Ptch1Q61115 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Ptch1Q61115 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC23.01■■□□□ 1.27
Ptch1Q61115 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC23.01■■□□□ 1.27
Ptch1Q61115 AC131710.1-201ENSMUST00000228336 990 ntBASIC23.01■■□□□ 1.27
Ptch1Q61115 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Ptch1Q61115 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ptch1Q61115 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
Ptch1Q61115 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Ptch1Q61115 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC23.01■■□□□ 1.27
Ptch1Q61115 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC23.01■■□□□ 1.27
Ptch1Q61115 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ptch1Q61115 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC23■■□□□ 1.27
Ptch1Q61115 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC23■■□□□ 1.27
Ptch1Q61115 Gm13823-201ENSMUST00000119930 345 ntBASIC23■■□□□ 1.27
Ptch1Q61115 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC23■■□□□ 1.27
Ptch1Q61115 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ptch1Q61115 Gm6257-201ENSMUST00000163864 910 ntBASIC23■■□□□ 1.27
Ptch1Q61115 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
Ptch1Q61115 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC23■■□□□ 1.27
Ptch1Q61115 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ptch1Q61115 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC23■■□□□ 1.27
Ptch1Q61115 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC23■■□□□ 1.27
Ptch1Q61115 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC23■■□□□ 1.27
Ptch1Q61115 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ptch1Q61115 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Ptch1Q61115 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
Ptch1Q61115 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ptch1Q61115 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Ptch1Q61115 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC23■■□□□ 1.27
Ptch1Q61115 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ptch1Q61115 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ptch1Q61115 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Ptch1Q61115 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ptch1Q61115 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ptch1Q61115 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Ptch1Q61115 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC22.99■■□□□ 1.27
Ptch1Q61115 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Ptch1Q61115 Gtpbp10-211ENSMUST00000198799 648 ntBASIC22.99■■□□□ 1.27
Ptch1Q61115 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ptch1Q61115 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ptch1Q61115 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC22.99■■□□□ 1.27
Ptch1Q61115 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Ptch1Q61115 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Ptch1Q61115 Gm42939-201ENSMUST00000197514 2205 ntBASIC22.99■■□□□ 1.27
Ptch1Q61115 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ptch1Q61115 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC22.99■■□□□ 1.27
Ptch1Q61115 Gm15693-201ENSMUST00000120470 637 ntBASIC22.99■■□□□ 1.27
Ptch1Q61115 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC22.98■■□□□ 1.27
Ptch1Q61115 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ptch1Q61115 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ptch1Q61115 Gm13410-201ENSMUST00000117058 1415 ntBASIC22.98■■□□□ 1.27
Ptch1Q61115 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ptch1Q61115 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC22.98■■□□□ 1.27
Ptch1Q61115 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ptch1Q61115 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC22.98■■□□□ 1.27
Ptch1Q61115 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
Ptch1Q61115 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC22.98■■□□□ 1.27
Ptch1Q61115 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
Ptch1Q61115 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC22.98■■□□□ 1.27
Ptch1Q61115 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC22.98■■□□□ 1.27
Ptch1Q61115 Rbfox2-208ENSMUST00000227930 1218 ntBASIC22.98■■□□□ 1.27
Ptch1Q61115 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ptch1Q61115 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC22.98■■□□□ 1.27
Ptch1Q61115 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Ptch1Q61115 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC22.97■■□□□ 1.27
Ptch1Q61115 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ptch1Q61115 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ptch1Q61115 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC22.97■■□□□ 1.27
Ptch1Q61115 Gm27306-201ENSMUST00000183970 107 ntBASIC22.97■■□□□ 1.27
Ptch1Q61115 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC22.97■■□□□ 1.27
Ptch1Q61115 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
Ptch1Q61115 Gm5184-201ENSMUST00000220417 1702 ntBASIC22.97■■□□□ 1.27
Ptch1Q61115 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ptch1Q61115 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
Ptch1Q61115 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC22.96■■□□□ 1.27
Ptch1Q61115 AC166341.4-201ENSMUST00000220625 123 ntBASIC22.96■■□□□ 1.27
Ptch1Q61115 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ptch1Q61115 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ptch1Q61115 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ptch1Q61115 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Ptch1Q61115 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Ptch1Q61115 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ptch1Q61115 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC22.95■■□□□ 1.27
Ptch1Q61115 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.27
Ptch1Q61115 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ptch1Q61115 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
Ptch1Q61115 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ptch1Q61115 CT030684.1-201ENSMUST00000227292 914 ntBASIC22.95■■□□□ 1.26
Ptch1Q61115 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ptch1Q61115 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Ptch1Q61115 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms