Protein–RNA interactions for Protein: Q5XFR0

Pabpn1l, Embryonic polyadenylate-binding protein 2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1lQ5XFR0 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pabpn1lQ5XFR0 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Pabpn1lQ5XFR0 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Pabpn1lQ5XFR0 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pabpn1lQ5XFR0 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pabpn1lQ5XFR0 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Pabpn1lQ5XFR0 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Pabpn1lQ5XFR0 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pabpn1lQ5XFR0 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pabpn1lQ5XFR0 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pabpn1lQ5XFR0 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pabpn1lQ5XFR0 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.14■□□□□ 0.17
Pabpn1lQ5XFR0 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Pabpn1lQ5XFR0 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.14■□□□□ 0.17
Pabpn1lQ5XFR0 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pabpn1lQ5XFR0 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pabpn1lQ5XFR0 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Pabpn1lQ5XFR0 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pabpn1lQ5XFR0 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pabpn1lQ5XFR0 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pabpn1lQ5XFR0 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pabpn1lQ5XFR0 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Pabpn1lQ5XFR0 App-207ENSMUST00000227737 2827 ntBASIC16.13■□□□□ 0.17
Pabpn1lQ5XFR0 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pabpn1lQ5XFR0 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pabpn1lQ5XFR0 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pabpn1lQ5XFR0 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.13■□□□□ 0.17
Pabpn1lQ5XFR0 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pabpn1lQ5XFR0 Trmt13-210ENSMUST00000198454 880 ntBASIC16.13■□□□□ 0.17
Pabpn1lQ5XFR0 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pabpn1lQ5XFR0 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pabpn1lQ5XFR0 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pabpn1lQ5XFR0 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.13■□□□□ 0.17
Pabpn1lQ5XFR0 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pabpn1lQ5XFR0 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pabpn1lQ5XFR0 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pabpn1lQ5XFR0 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pabpn1lQ5XFR0 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pabpn1lQ5XFR0 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pabpn1lQ5XFR0 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pabpn1lQ5XFR0 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pabpn1lQ5XFR0 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.13■□□□□ 0.17
Pabpn1lQ5XFR0 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pabpn1lQ5XFR0 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
Pabpn1lQ5XFR0 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pabpn1lQ5XFR0 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pabpn1lQ5XFR0 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.12■□□□□ 0.17
Pabpn1lQ5XFR0 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.12■□□□□ 0.17
Pabpn1lQ5XFR0 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.12■□□□□ 0.17
Pabpn1lQ5XFR0 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pabpn1lQ5XFR0 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pabpn1lQ5XFR0 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pabpn1lQ5XFR0 Gm11927-201ENSMUST00000118472 759 ntBASIC16.12■□□□□ 0.17
Pabpn1lQ5XFR0 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Pabpn1lQ5XFR0 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pabpn1lQ5XFR0 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.12■□□□□ 0.17
Pabpn1lQ5XFR0 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pabpn1lQ5XFR0 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pabpn1lQ5XFR0 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pabpn1lQ5XFR0 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Pabpn1lQ5XFR0 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pabpn1lQ5XFR0 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.12■□□□□ 0.17
Pabpn1lQ5XFR0 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pabpn1lQ5XFR0 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pabpn1lQ5XFR0 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.12■□□□□ 0.17
Pabpn1lQ5XFR0 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.12■□□□□ 0.17
Pabpn1lQ5XFR0 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pabpn1lQ5XFR0 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pabpn1lQ5XFR0 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pabpn1lQ5XFR0 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pabpn1lQ5XFR0 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pabpn1lQ5XFR0 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.11■□□□□ 0.17
Pabpn1lQ5XFR0 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pabpn1lQ5XFR0 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Pabpn1lQ5XFR0 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Pabpn1lQ5XFR0 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pabpn1lQ5XFR0 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Pabpn1lQ5XFR0 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pabpn1lQ5XFR0 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.11■□□□□ 0.17
Pabpn1lQ5XFR0 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.11■□□□□ 0.17
Pabpn1lQ5XFR0 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pabpn1lQ5XFR0 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pabpn1lQ5XFR0 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pabpn1lQ5XFR0 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pabpn1lQ5XFR0 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Pabpn1lQ5XFR0 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pabpn1lQ5XFR0 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pabpn1lQ5XFR0 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pabpn1lQ5XFR0 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pabpn1lQ5XFR0 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pabpn1lQ5XFR0 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pabpn1lQ5XFR0 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pabpn1lQ5XFR0 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Pabpn1lQ5XFR0 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pabpn1lQ5XFR0 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pabpn1lQ5XFR0 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pabpn1lQ5XFR0 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.1■□□□□ 0.17
Pabpn1lQ5XFR0 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Pabpn1lQ5XFR0 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pabpn1lQ5XFR0 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms