Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Scaf1Q5U4C3 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Scaf1Q5U4C3 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scaf1Q5U4C3 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scaf1Q5U4C3 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scaf1Q5U4C3 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scaf1Q5U4C3 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Scaf1Q5U4C3 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Scaf1Q5U4C3 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Scaf1Q5U4C3 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Scaf1Q5U4C3 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Scaf1Q5U4C3 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scaf1Q5U4C3 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC20.86■□□□□ 0.93
Scaf1Q5U4C3 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scaf1Q5U4C3 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
Scaf1Q5U4C3 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scaf1Q5U4C3 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Scaf1Q5U4C3 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Scaf1Q5U4C3 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC20.86■□□□□ 0.93
Scaf1Q5U4C3 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scaf1Q5U4C3 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC20.86■□□□□ 0.93
Scaf1Q5U4C3 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Scaf1Q5U4C3 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scaf1Q5U4C3 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.86■□□□□ 0.93
Scaf1Q5U4C3 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scaf1Q5U4C3 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scaf1Q5U4C3 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scaf1Q5U4C3 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scaf1Q5U4C3 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scaf1Q5U4C3 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scaf1Q5U4C3 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scaf1Q5U4C3 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Scaf1Q5U4C3 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Scaf1Q5U4C3 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scaf1Q5U4C3 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scaf1Q5U4C3 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scaf1Q5U4C3 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Scaf1Q5U4C3 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scaf1Q5U4C3 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scaf1Q5U4C3 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scaf1Q5U4C3 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Scaf1Q5U4C3 H2af-ps-201ENSMUST00000119066 295 ntBASIC20.85■□□□□ 0.93
Scaf1Q5U4C3 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC20.85■□□□□ 0.93
Scaf1Q5U4C3 Gm11025-201ENSMUST00000140773 466 ntBASIC20.85■□□□□ 0.93
Scaf1Q5U4C3 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC20.85■□□□□ 0.93
Scaf1Q5U4C3 Bloc1s5-203ENSMUST00000224902 612 ntBASIC20.85■□□□□ 0.93
Scaf1Q5U4C3 AC151836.1-202ENSMUST00000226259 753 ntBASIC20.85■□□□□ 0.93
Scaf1Q5U4C3 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scaf1Q5U4C3 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Scaf1Q5U4C3 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Scaf1Q5U4C3 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scaf1Q5U4C3 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scaf1Q5U4C3 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scaf1Q5U4C3 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scaf1Q5U4C3 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC20.84■□□□□ 0.93
Scaf1Q5U4C3 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scaf1Q5U4C3 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scaf1Q5U4C3 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scaf1Q5U4C3 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scaf1Q5U4C3 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scaf1Q5U4C3 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Scaf1Q5U4C3 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scaf1Q5U4C3 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Scaf1Q5U4C3 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Scaf1Q5U4C3 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scaf1Q5U4C3 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Scaf1Q5U4C3 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Scaf1Q5U4C3 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC20.84■□□□□ 0.93
Scaf1Q5U4C3 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scaf1Q5U4C3 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC20.84■□□□□ 0.93
Scaf1Q5U4C3 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Scaf1Q5U4C3 Gm38318-201ENSMUST00000195769 1706 ntBASIC20.84■□□□□ 0.93
Scaf1Q5U4C3 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
Scaf1Q5U4C3 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Scaf1Q5U4C3 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Scaf1Q5U4C3 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Scaf1Q5U4C3 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Scaf1Q5U4C3 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Scaf1Q5U4C3 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Scaf1Q5U4C3 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Scaf1Q5U4C3 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Scaf1Q5U4C3 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Scaf1Q5U4C3 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC20.83■□□□□ 0.93
Scaf1Q5U4C3 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC20.83■□□□□ 0.93
Scaf1Q5U4C3 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Scaf1Q5U4C3 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC20.83■□□□□ 0.93
Scaf1Q5U4C3 Chchd1-203ENSMUST00000224633 557 ntBASIC20.83■□□□□ 0.93
Scaf1Q5U4C3 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Scaf1Q5U4C3 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Scaf1Q5U4C3 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Scaf1Q5U4C3 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Scaf1Q5U4C3 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20.83■□□□□ 0.92
Scaf1Q5U4C3 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Scaf1Q5U4C3 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.92
Scaf1Q5U4C3 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC20.83■□□□□ 0.92
Scaf1Q5U4C3 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Scaf1Q5U4C3 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scaf1Q5U4C3 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC20.82■□□□□ 0.92
Scaf1Q5U4C3 AC119177.1-201ENSMUST00000227647 1332 ntBASIC20.82■□□□□ 0.92
Scaf1Q5U4C3 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms