Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav8d-1Q5R1H8 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav8d-1Q5R1H8 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav8d-1Q5R1H8 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav8d-1Q5R1H8 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC13.2□□□□□ -0.3
Trav8d-1Q5R1H8 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav8d-1Q5R1H8 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav8d-1Q5R1H8 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav8d-1Q5R1H8 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav8d-1Q5R1H8 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav8d-1Q5R1H8 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav8d-1Q5R1H8 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav8d-1Q5R1H8 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav8d-1Q5R1H8 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav8d-1Q5R1H8 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav8d-1Q5R1H8 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav8d-1Q5R1H8 Mir5122-201ENSMUST00000175004 89 ntBASIC13.2□□□□□ -0.3
Trav8d-1Q5R1H8 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav8d-1Q5R1H8 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav8d-1Q5R1H8 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC13.2□□□□□ -0.3
Trav8d-1Q5R1H8 Gm16042-201ENSMUST00000204813 1247 ntBASIC13.2□□□□□ -0.3
Trav8d-1Q5R1H8 Gm10252-201ENSMUST00000209541 832 ntBASIC13.2□□□□□ -0.3
Trav8d-1Q5R1H8 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav8d-1Q5R1H8 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav8d-1Q5R1H8 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Trav8d-1Q5R1H8 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav8d-1Q5R1H8 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.2□□□□□ -0.3
Trav8d-1Q5R1H8 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav8d-1Q5R1H8 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav8d-1Q5R1H8 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav8d-1Q5R1H8 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav8d-1Q5R1H8 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav8d-1Q5R1H8 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Trav8d-1Q5R1H8 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav8d-1Q5R1H8 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav8d-1Q5R1H8 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav8d-1Q5R1H8 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav8d-1Q5R1H8 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav8d-1Q5R1H8 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav8d-1Q5R1H8 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav8d-1Q5R1H8 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav8d-1Q5R1H8 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav8d-1Q5R1H8 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav8d-1Q5R1H8 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav8d-1Q5R1H8 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav8d-1Q5R1H8 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav8d-1Q5R1H8 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav8d-1Q5R1H8 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav8d-1Q5R1H8 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav8d-1Q5R1H8 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC13.19□□□□□ -0.3
Trav8d-1Q5R1H8 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav8d-1Q5R1H8 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav8d-1Q5R1H8 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav8d-1Q5R1H8 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav8d-1Q5R1H8 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav8d-1Q5R1H8 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav8d-1Q5R1H8 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trav8d-1Q5R1H8 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav8d-1Q5R1H8 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav8d-1Q5R1H8 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav8d-1Q5R1H8 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav8d-1Q5R1H8 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav8d-1Q5R1H8 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav8d-1Q5R1H8 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav8d-1Q5R1H8 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav8d-1Q5R1H8 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav8d-1Q5R1H8 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav8d-1Q5R1H8 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav8d-1Q5R1H8 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav8d-1Q5R1H8 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav8d-1Q5R1H8 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav8d-1Q5R1H8 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav8d-1Q5R1H8 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav8d-1Q5R1H8 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav8d-1Q5R1H8 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav8d-1Q5R1H8 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav8d-1Q5R1H8 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav8d-1Q5R1H8 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav8d-1Q5R1H8 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav8d-1Q5R1H8 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav8d-1Q5R1H8 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav8d-1Q5R1H8 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav8d-1Q5R1H8 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC13.18□□□□□ -0.3
Trav8d-1Q5R1H8 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav8d-1Q5R1H8 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC13.18□□□□□ -0.3
Trav8d-1Q5R1H8 Mir6982-201ENSMUST00000184354 68 ntBASIC13.18□□□□□ -0.3
Trav8d-1Q5R1H8 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav8d-1Q5R1H8 Gm37055-201ENSMUST00000191866 133 ntBASIC13.18□□□□□ -0.3
Trav8d-1Q5R1H8 Arhgef4-208ENSMUST00000211073 171 ntBASIC13.18□□□□□ -0.3
Trav8d-1Q5R1H8 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC13.18□□□□□ -0.3
Trav8d-1Q5R1H8 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC13.18□□□□□ -0.3
Trav8d-1Q5R1H8 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Trav8d-1Q5R1H8 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav8d-1Q5R1H8 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav8d-1Q5R1H8 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav8d-1Q5R1H8 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav8d-1Q5R1H8 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav8d-1Q5R1H8 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav8d-1Q5R1H8 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav8d-1Q5R1H8 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms