Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.54□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.53□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC12.53□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Gm38027-201ENSMUST00000192315 235 ntBASIC12.53□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.53□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.53□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.52□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Gm14464-201ENSMUST00000119658 1254 ntBASIC12.52□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Gm8495-201ENSMUST00000188740 694 ntBASIC12.52□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC12.51□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.51□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 AC154855.1-201ENSMUST00000227353 1458 ntBASIC12.51□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms