Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Gm11764-201ENSMUST00000120221 623 ntBASIC16.31■□□□□ 0.2
Rnf43Q5NCP0 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf43Q5NCP0 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Rnf43Q5NCP0 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.31■□□□□ 0.2
Rnf43Q5NCP0 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf43Q5NCP0 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.31■□□□□ 0.2
Rnf43Q5NCP0 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf43Q5NCP0 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf43Q5NCP0 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf43Q5NCP0 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf43Q5NCP0 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf43Q5NCP0 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf43Q5NCP0 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf43Q5NCP0 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf43Q5NCP0 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf43Q5NCP0 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Rnf43Q5NCP0 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf43Q5NCP0 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf43Q5NCP0 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf43Q5NCP0 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf43Q5NCP0 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Rnf43Q5NCP0 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.3■□□□□ 0.2
Rnf43Q5NCP0 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.3■□□□□ 0.2
Rnf43Q5NCP0 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.3■□□□□ 0.2
Rnf43Q5NCP0 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.3■□□□□ 0.2
Rnf43Q5NCP0 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.3■□□□□ 0.2
Rnf43Q5NCP0 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf43Q5NCP0 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf43Q5NCP0 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Rnf43Q5NCP0 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf43Q5NCP0 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf43Q5NCP0 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf43Q5NCP0 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf43Q5NCP0 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rnf43Q5NCP0 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf43Q5NCP0 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Rnf43Q5NCP0 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf43Q5NCP0 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf43Q5NCP0 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf43Q5NCP0 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf43Q5NCP0 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Rnf43Q5NCP0 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.29■□□□□ 0.2
Rnf43Q5NCP0 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Rnf43Q5NCP0 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Rnf43Q5NCP0 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf43Q5NCP0 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.29■□□□□ 0.2
Rnf43Q5NCP0 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.29■□□□□ 0.2
Rnf43Q5NCP0 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf43Q5NCP0 Mir6404-201ENSMUST00000183699 94 ntBASIC16.29■□□□□ 0.2
Rnf43Q5NCP0 Mir8117-201ENSMUST00000184773 107 ntBASIC16.29■□□□□ 0.2
Rnf43Q5NCP0 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf43Q5NCP0 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf43Q5NCP0 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf43Q5NCP0 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf43Q5NCP0 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf43Q5NCP0 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf43Q5NCP0 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf43Q5NCP0 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Rnf43Q5NCP0 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.29■□□□□ 0.2
Rnf43Q5NCP0 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf43Q5NCP0 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf43Q5NCP0 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf43Q5NCP0 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf43Q5NCP0 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf43Q5NCP0 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.28■□□□□ 0.2
Rnf43Q5NCP0 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.28■□□□□ 0.2
Rnf43Q5NCP0 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf43Q5NCP0 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.28■□□□□ 0.2
Rnf43Q5NCP0 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.28■□□□□ 0.2
Rnf43Q5NCP0 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.28■□□□□ 0.2
Rnf43Q5NCP0 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.28■□□□□ 0.2
Rnf43Q5NCP0 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf43Q5NCP0 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf43Q5NCP0 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Rnf43Q5NCP0 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf43Q5NCP0 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf43Q5NCP0 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf43Q5NCP0 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf43Q5NCP0 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf43Q5NCP0 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf43Q5NCP0 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Rnf43Q5NCP0 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf43Q5NCP0 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf43Q5NCP0 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf43Q5NCP0 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf43Q5NCP0 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Rnf43Q5NCP0 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.27■□□□□ 0.2
Rnf43Q5NCP0 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.27■□□□□ 0.2
Rnf43Q5NCP0 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.27■□□□□ 0.2
Rnf43Q5NCP0 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.27■□□□□ 0.2
Rnf43Q5NCP0 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf43Q5NCP0 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rnf43Q5NCP0 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Rnf43Q5NCP0 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Rnf43Q5NCP0 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rnf43Q5NCP0 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rnf43Q5NCP0 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rnf43Q5NCP0 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Rnf43Q5NCP0 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf43Q5NCP0 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms