Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp48Q3V0C5 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp48Q3V0C5 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp48Q3V0C5 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp48Q3V0C5 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Usp48Q3V0C5 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Usp48Q3V0C5 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC19.82■□□□□ 0.76
Usp48Q3V0C5 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Usp48Q3V0C5 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
Usp48Q3V0C5 AC151286.1-201ENSMUST00000198489 145 ntBASIC19.82■□□□□ 0.76
Usp48Q3V0C5 Gm44430-201ENSMUST00000203376 995 ntBASIC19.82■□□□□ 0.76
Usp48Q3V0C5 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp48Q3V0C5 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp48Q3V0C5 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp48Q3V0C5 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp48Q3V0C5 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Usp48Q3V0C5 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp48Q3V0C5 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp48Q3V0C5 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Usp48Q3V0C5 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp48Q3V0C5 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Usp48Q3V0C5 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Usp48Q3V0C5 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp48Q3V0C5 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Usp48Q3V0C5 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp48Q3V0C5 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp48Q3V0C5 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp48Q3V0C5 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Usp48Q3V0C5 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Usp48Q3V0C5 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp48Q3V0C5 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Usp48Q3V0C5 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp48Q3V0C5 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp48Q3V0C5 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp48Q3V0C5 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp48Q3V0C5 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp48Q3V0C5 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp48Q3V0C5 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC19.81■□□□□ 0.76
Usp48Q3V0C5 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC19.81■□□□□ 0.76
Usp48Q3V0C5 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp48Q3V0C5 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Usp48Q3V0C5 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Usp48Q3V0C5 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC19.81■□□□□ 0.76
Usp48Q3V0C5 AV026068-213ENSMUST00000223675 1171 ntBASIC19.81■□□□□ 0.76
Usp48Q3V0C5 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC19.81■□□□□ 0.76
Usp48Q3V0C5 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp48Q3V0C5 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Usp48Q3V0C5 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp48Q3V0C5 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Usp48Q3V0C5 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Usp48Q3V0C5 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Usp48Q3V0C5 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp48Q3V0C5 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp48Q3V0C5 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Usp48Q3V0C5 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Usp48Q3V0C5 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp48Q3V0C5 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC19.8■□□□□ 0.76
Usp48Q3V0C5 Gm7506-201ENSMUST00000207758 815 ntBASIC19.8■□□□□ 0.76
Usp48Q3V0C5 Gm45683-201ENSMUST00000210825 1247 ntBASIC19.8■□□□□ 0.76
Usp48Q3V0C5 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC19.8■□□□□ 0.76
Usp48Q3V0C5 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp48Q3V0C5 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp48Q3V0C5 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC19.8■□□□□ 0.76
Usp48Q3V0C5 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Usp48Q3V0C5 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Usp48Q3V0C5 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Usp48Q3V0C5 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp48Q3V0C5 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp48Q3V0C5 Gm28265-201ENSMUST00000188201 2319 ntBASIC19.79■□□□□ 0.76
Usp48Q3V0C5 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp48Q3V0C5 Gm27628-201ENSMUST00000184911 107 ntBASIC19.79■□□□□ 0.76
Usp48Q3V0C5 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp48Q3V0C5 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp48Q3V0C5 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC19.79■□□□□ 0.76
Usp48Q3V0C5 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp48Q3V0C5 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Usp48Q3V0C5 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp48Q3V0C5 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp48Q3V0C5 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp48Q3V0C5 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Usp48Q3V0C5 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp48Q3V0C5 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp48Q3V0C5 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
Usp48Q3V0C5 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC19.78■□□□□ 0.76
Usp48Q3V0C5 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Usp48Q3V0C5 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp48Q3V0C5 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp48Q3V0C5 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp48Q3V0C5 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Usp48Q3V0C5 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp48Q3V0C5 Gm13216-201ENSMUST00000117145 591 ntBASIC19.78■□□□□ 0.76
Usp48Q3V0C5 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Usp48Q3V0C5 Bloc1s5-203ENSMUST00000224902 612 ntBASIC19.78■□□□□ 0.76
Usp48Q3V0C5 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
Usp48Q3V0C5 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Usp48Q3V0C5 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp48Q3V0C5 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC19.78■□□□□ 0.76
Usp48Q3V0C5 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Usp48Q3V0C5 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp48Q3V0C5 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms