Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim43aQ3TL54 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim43aQ3TL54 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Trim43aQ3TL54 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim43aQ3TL54 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.05■□□□□ 0.32
Trim43aQ3TL54 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim43aQ3TL54 Gm6433-201ENSMUST00000118634 875 ntBASIC17.05■□□□□ 0.32
Trim43aQ3TL54 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim43aQ3TL54 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.05■□□□□ 0.32
Trim43aQ3TL54 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim43aQ3TL54 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim43aQ3TL54 Gm3375-201ENSMUST00000203929 796 ntBASIC17.05■□□□□ 0.32
Trim43aQ3TL54 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim43aQ3TL54 Gm30025-201ENSMUST00000218555 728 ntBASIC17.05■□□□□ 0.32
Trim43aQ3TL54 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim43aQ3TL54 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim43aQ3TL54 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim43aQ3TL54 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim43aQ3TL54 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43aQ3TL54 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43aQ3TL54 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43aQ3TL54 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43aQ3TL54 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43aQ3TL54 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43aQ3TL54 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43aQ3TL54 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43aQ3TL54 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43aQ3TL54 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43aQ3TL54 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43aQ3TL54 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43aQ3TL54 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43aQ3TL54 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43aQ3TL54 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43aQ3TL54 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43aQ3TL54 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.04■□□□□ 0.32
Trim43aQ3TL54 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.04■□□□□ 0.32
Trim43aQ3TL54 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43aQ3TL54 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43aQ3TL54 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Trim43aQ3TL54 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Trim43aQ3TL54 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Trim43aQ3TL54 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43aQ3TL54 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43aQ3TL54 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.04■□□□□ 0.32
Trim43aQ3TL54 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Trim43aQ3TL54 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Trim43aQ3TL54 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43aQ3TL54 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43aQ3TL54 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43aQ3TL54 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43aQ3TL54 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Trim43aQ3TL54 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43aQ3TL54 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43aQ3TL54 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43aQ3TL54 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43aQ3TL54 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43aQ3TL54 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43aQ3TL54 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43aQ3TL54 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43aQ3TL54 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43aQ3TL54 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43aQ3TL54 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.03■□□□□ 0.32
Trim43aQ3TL54 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim43aQ3TL54 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim43aQ3TL54 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.03■□□□□ 0.32
Trim43aQ3TL54 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim43aQ3TL54 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim43aQ3TL54 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim43aQ3TL54 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.03■□□□□ 0.32
Trim43aQ3TL54 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.03■□□□□ 0.32
Trim43aQ3TL54 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.03■□□□□ 0.32
Trim43aQ3TL54 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim43aQ3TL54 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim43aQ3TL54 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.03■□□□□ 0.32
Trim43aQ3TL54 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim43aQ3TL54 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.03■□□□□ 0.32
Trim43aQ3TL54 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim43aQ3TL54 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim43aQ3TL54 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim43aQ3TL54 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim43aQ3TL54 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim43aQ3TL54 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim43aQ3TL54 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim43aQ3TL54 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim43aQ3TL54 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.03■□□□□ 0.32
Trim43aQ3TL54 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.03■□□□□ 0.32
Trim43aQ3TL54 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim43aQ3TL54 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim43aQ3TL54 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Trim43aQ3TL54 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim43aQ3TL54 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim43aQ3TL54 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim43aQ3TL54 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.02■□□□□ 0.32
Trim43aQ3TL54 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim43aQ3TL54 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim43aQ3TL54 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim43aQ3TL54 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim43aQ3TL54 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim43aQ3TL54 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim43aQ3TL54 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms