Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx4Q07424 Gm3272-201ENSMUST00000181181 1229 ntBASIC12.41□□□□□ -0.42
Cdx4Q07424 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx4Q07424 Gm37722-201ENSMUST00000193757 208 ntBASIC12.41□□□□□ -0.42
Cdx4Q07424 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Cdx4Q07424 AC130713.1-201ENSMUST00000228853 1096 ntBASIC12.41□□□□□ -0.42
Cdx4Q07424 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx4Q07424 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx4Q07424 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx4Q07424 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx4Q07424 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx4Q07424 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC12.41□□□□□ -0.42
Cdx4Q07424 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx4Q07424 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx4Q07424 Gm10566-201ENSMUST00000086739 996 ntBASIC12.41□□□□□ -0.42
Cdx4Q07424 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx4Q07424 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx4Q07424 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx4Q07424 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx4Q07424 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx4Q07424 AL590614.2-201ENSMUST00000225374 1937 ntBASIC12.41□□□□□ -0.42
Cdx4Q07424 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx4Q07424 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx4Q07424 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx4Q07424 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx4Q07424 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC12.4□□□□□ -0.42
Cdx4Q07424 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx4Q07424 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx4Q07424 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx4Q07424 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx4Q07424 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx4Q07424 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx4Q07424 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx4Q07424 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx4Q07424 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx4Q07424 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx4Q07424 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx4Q07424 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx4Q07424 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx4Q07424 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx4Q07424 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx4Q07424 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx4Q07424 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC12.4□□□□□ -0.42
Cdx4Q07424 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Cdx4Q07424 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC12.4□□□□□ -0.42
Cdx4Q07424 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC12.4□□□□□ -0.42
Cdx4Q07424 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC12.4□□□□□ -0.42
Cdx4Q07424 Gm17807-201ENSMUST00000186869 298 ntBASIC12.4□□□□□ -0.42
Cdx4Q07424 Ank2-226ENSMUST00000189368 339 ntBASIC12.4□□□□□ -0.42
Cdx4Q07424 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC12.4□□□□□ -0.42
Cdx4Q07424 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx4Q07424 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx4Q07424 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx4Q07424 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx4Q07424 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx4Q07424 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx4Q07424 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Cdx4Q07424 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx4Q07424 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Cdx4Q07424 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx4Q07424 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC12.4□□□□□ -0.42
Cdx4Q07424 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Cdx4Q07424 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx4Q07424 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Cdx4Q07424 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx4Q07424 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx4Q07424 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC12.4□□□□□ -0.43
Cdx4Q07424 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cdx4Q07424 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cdx4Q07424 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cdx4Q07424 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC12.4□□□□□ -0.43
Cdx4Q07424 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cdx4Q07424 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Cdx4Q07424 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cdx4Q07424 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx4Q07424 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx4Q07424 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx4Q07424 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx4Q07424 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Cdx4Q07424 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx4Q07424 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx4Q07424 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx4Q07424 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx4Q07424 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx4Q07424 Gm36858-201ENSMUST00000194501 2391 ntBASIC12.39□□□□□ -0.43
Cdx4Q07424 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx4Q07424 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx4Q07424 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC12.39□□□□□ -0.43
Cdx4Q07424 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx4Q07424 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx4Q07424 Gm27741-201ENSMUST00000185060 237 ntBASIC12.39□□□□□ -0.43
Cdx4Q07424 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC12.39□□□□□ -0.43
Cdx4Q07424 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.39□□□□□ -0.43
Cdx4Q07424 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.39□□□□□ -0.43
Cdx4Q07424 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx4Q07424 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Cdx4Q07424 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx4Q07424 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx4Q07424 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx4Q07424 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms