Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Thbs3Q05895 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Thbs3Q05895 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Thbs3Q05895 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Thbs3Q05895 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Thbs3Q05895 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.09□□□□□ -0.15
Thbs3Q05895 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.09□□□□□ -0.15
Thbs3Q05895 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Thbs3Q05895 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.09□□□□□ -0.15
Thbs3Q05895 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.09□□□□□ -0.15
Thbs3Q05895 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Thbs3Q05895 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Thbs3Q05895 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.09□□□□□ -0.15
Thbs3Q05895 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Thbs3Q05895 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Thbs3Q05895 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Thbs3Q05895 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Thbs3Q05895 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Thbs3Q05895 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Thbs3Q05895 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Thbs3Q05895 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Thbs3Q05895 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Thbs3Q05895 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Thbs3Q05895 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Thbs3Q05895 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Thbs3Q05895 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.08□□□□□ -0.15
Thbs3Q05895 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Thbs3Q05895 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Thbs3Q05895 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Thbs3Q05895 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Thbs3Q05895 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Thbs3Q05895 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Thbs3Q05895 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Thbs3Q05895 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Thbs3Q05895 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Thbs3Q05895 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Thbs3Q05895 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Thbs3Q05895 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Thbs3Q05895 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Thbs3Q05895 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Thbs3Q05895 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Thbs3Q05895 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Thbs3Q05895 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Thbs3Q05895 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Thbs3Q05895 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Thbs3Q05895 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Thbs3Q05895 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Thbs3Q05895 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Thbs3Q05895 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.07□□□□□ -0.16
Thbs3Q05895 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Thbs3Q05895 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Thbs3Q05895 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Thbs3Q05895 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Thbs3Q05895 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Thbs3Q05895 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Thbs3Q05895 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.07□□□□□ -0.16
Thbs3Q05895 Mir3081-201ENSMUST00000175305 84 ntBASIC14.07□□□□□ -0.16
Thbs3Q05895 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Thbs3Q05895 Mir6404-201ENSMUST00000183699 94 ntBASIC14.07□□□□□ -0.16
Thbs3Q05895 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Thbs3Q05895 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Thbs3Q05895 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Thbs3Q05895 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Thbs3Q05895 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Thbs3Q05895 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Thbs3Q05895 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Thbs3Q05895 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Thbs3Q05895 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Thbs3Q05895 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Thbs3Q05895 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Thbs3Q05895 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Thbs3Q05895 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Thbs3Q05895 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Thbs3Q05895 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Thbs3Q05895 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Thbs3Q05895 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Thbs3Q05895 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.07□□□□□ -0.16
Thbs3Q05895 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Thbs3Q05895 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Thbs3Q05895 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Thbs3Q05895 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Thbs3Q05895 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Thbs3Q05895 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Thbs3Q05895 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Thbs3Q05895 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Thbs3Q05895 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Thbs3Q05895 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Thbs3Q05895 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.06□□□□□ -0.16
Thbs3Q05895 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Thbs3Q05895 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Thbs3Q05895 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Thbs3Q05895 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Thbs3Q05895 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Thbs3Q05895 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.06□□□□□ -0.16
Thbs3Q05895 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.06□□□□□ -0.16
Thbs3Q05895 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.06□□□□□ -0.16
Thbs3Q05895 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Thbs3Q05895 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.06□□□□□ -0.16
Thbs3Q05895 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Thbs3Q05895 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms