Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Xrn1P97789 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC22.75■■□□□ 1.23
Xrn1P97789 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Xrn1P97789 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
Xrn1P97789 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Xrn1P97789 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Xrn1P97789 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
Xrn1P97789 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Xrn1P97789 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Xrn1P97789 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC22.74■■□□□ 1.23
Xrn1P97789 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Xrn1P97789 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC22.74■■□□□ 1.23
Xrn1P97789 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Xrn1P97789 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Xrn1P97789 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Xrn1P97789 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Xrn1P97789 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Xrn1P97789 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Xrn1P97789 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Xrn1P97789 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Xrn1P97789 AC126250.1-201ENSMUST00000228343 1768 ntBASIC22.73■■□□□ 1.23
Xrn1P97789 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Xrn1P97789 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Xrn1P97789 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC22.73■■□□□ 1.23
Xrn1P97789 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Xrn1P97789 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Xrn1P97789 Gm5186-201ENSMUST00000218781 920 ntBASIC22.73■■□□□ 1.23
Xrn1P97789 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Xrn1P97789 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Xrn1P97789 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Xrn1P97789 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC22.73■■□□□ 1.23
Xrn1P97789 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Xrn1P97789 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Xrn1P97789 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Xrn1P97789 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Xrn1P97789 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC22.72■■□□□ 1.23
Xrn1P97789 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Xrn1P97789 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC22.72■■□□□ 1.23
Xrn1P97789 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC22.72■■□□□ 1.23
Xrn1P97789 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Xrn1P97789 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Xrn1P97789 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Xrn1P97789 Fgf17-202ENSMUST00000227123 1336 ntBASIC22.72■■□□□ 1.23
Xrn1P97789 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
Xrn1P97789 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Xrn1P97789 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Xrn1P97789 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Xrn1P97789 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Xrn1P97789 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
Xrn1P97789 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Xrn1P97789 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Xrn1P97789 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Xrn1P97789 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Xrn1P97789 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Xrn1P97789 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Xrn1P97789 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC22.71■■□□□ 1.23
Xrn1P97789 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Xrn1P97789 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
Xrn1P97789 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Xrn1P97789 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Xrn1P97789 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Xrn1P97789 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Xrn1P97789 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC22.7■■□□□ 1.22
Xrn1P97789 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC22.7■■□□□ 1.22
Xrn1P97789 Gm10253-201ENSMUST00000194270 940 ntBASIC22.7■■□□□ 1.22
Xrn1P97789 Gm7774-201ENSMUST00000200064 533 ntBASIC22.7■■□□□ 1.22
Xrn1P97789 CT025555.1-201ENSMUST00000225901 1217 ntBASIC22.7■■□□□ 1.22
Xrn1P97789 Rbfox2-208ENSMUST00000227930 1218 ntBASIC22.7■■□□□ 1.22
Xrn1P97789 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC22.7■■□□□ 1.22
Xrn1P97789 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Xrn1P97789 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Xrn1P97789 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC22.69■■□□□ 1.22
Xrn1P97789 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC22.69■■□□□ 1.22
Xrn1P97789 Gm13223-201ENSMUST00000118609 747 ntBASIC22.69■■□□□ 1.22
Xrn1P97789 AC140397.2-201ENSMUST00000224213 834 ntBASIC22.69■■□□□ 1.22
Xrn1P97789 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
Xrn1P97789 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Xrn1P97789 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
Xrn1P97789 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Xrn1P97789 Gm6598-201ENSMUST00000202719 2615 ntBASIC22.69■■□□□ 1.22
Xrn1P97789 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC22.69■■□□□ 1.22
Xrn1P97789 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Xrn1P97789 Gm25287-201ENSMUST00000103846 110 ntBASIC22.68■■□□□ 1.22
Xrn1P97789 Gm22918-201ENSMUST00000103855 110 ntBASIC22.68■■□□□ 1.22
Xrn1P97789 Gm7336-201ENSMUST00000107041 1232 ntBASIC22.68■■□□□ 1.22
Xrn1P97789 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC22.68■■□□□ 1.22
Xrn1P97789 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC22.68■■□□□ 1.22
Xrn1P97789 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC22.68■■□□□ 1.22
Xrn1P97789 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Xrn1P97789 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Xrn1P97789 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC22.68■■□□□ 1.22
Xrn1P97789 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Xrn1P97789 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC22.68■■□□□ 1.22
Xrn1P97789 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Xrn1P97789 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC22.68■■□□□ 1.22
Xrn1P97789 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Xrn1P97789 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Xrn1P97789 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Xrn1P97789 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Xrn1P97789 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms