Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
PrkdcP97313 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
PrkdcP97313 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
PrkdcP97313 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC10.91□□□□□ -0.66
PrkdcP97313 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
PrkdcP97313 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC10.91□□□□□ -0.66
PrkdcP97313 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
PrkdcP97313 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
PrkdcP97313 Gm5828-201ENSMUST00000071842 1860 ntBASIC10.91□□□□□ -0.66
PrkdcP97313 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
PrkdcP97313 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
PrkdcP97313 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
PrkdcP97313 Gm7488-201ENSMUST00000117148 684 ntBASIC10.91□□□□□ -0.66
PrkdcP97313 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
PrkdcP97313 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
PrkdcP97313 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
PrkdcP97313 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
PrkdcP97313 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
PrkdcP97313 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
PrkdcP97313 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
PrkdcP97313 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
PrkdcP97313 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
PrkdcP97313 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
PrkdcP97313 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC10.91□□□□□ -0.66
PrkdcP97313 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC10.91□□□□□ -0.66
PrkdcP97313 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC10.91□□□□□ -0.66
PrkdcP97313 Gm6218-201ENSMUST00000219812 628 ntBASIC10.91□□□□□ -0.66
PrkdcP97313 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
PrkdcP97313 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
PrkdcP97313 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC10.9□□□□□ -0.66
PrkdcP97313 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
PrkdcP97313 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
PrkdcP97313 AC158538.2-201ENSMUST00000225455 906 ntBASIC10.9□□□□□ -0.66
PrkdcP97313 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
PrkdcP97313 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC10.9□□□□□ -0.66
PrkdcP97313 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
PrkdcP97313 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
PrkdcP97313 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
PrkdcP97313 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
PrkdcP97313 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
PrkdcP97313 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
PrkdcP97313 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
PrkdcP97313 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
PrkdcP97313 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
PrkdcP97313 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
PrkdcP97313 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
PrkdcP97313 Gm6973-201ENSMUST00000117080 721 ntBASIC10.9□□□□□ -0.67
PrkdcP97313 Gm17150-201ENSMUST00000165577 381 ntBASIC10.9□□□□□ -0.67
PrkdcP97313 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC10.9□□□□□ -0.67
PrkdcP97313 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC10.9□□□□□ -0.67
PrkdcP97313 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
PrkdcP97313 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PrkdcP97313 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PrkdcP97313 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
PrkdcP97313 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PrkdcP97313 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
PrkdcP97313 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
PrkdcP97313 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
PrkdcP97313 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PrkdcP97313 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PrkdcP97313 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC10.89□□□□□ -0.67
PrkdcP97313 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC10.89□□□□□ -0.67
PrkdcP97313 Gm12017-201ENSMUST00000122453 1003 ntBASIC10.89□□□□□ -0.67
PrkdcP97313 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
PrkdcP97313 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PrkdcP97313 Gm16215-201ENSMUST00000161990 637 ntBASIC10.89□□□□□ -0.67
PrkdcP97313 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
PrkdcP97313 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
PrkdcP97313 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PrkdcP97313 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC10.89□□□□□ -0.67
PrkdcP97313 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PrkdcP97313 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC10.89□□□□□ -0.67
PrkdcP97313 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC10.89□□□□□ -0.67
PrkdcP97313 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
PrkdcP97313 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
PrkdcP97313 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PrkdcP97313 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PrkdcP97313 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC10.89□□□□□ -0.67
PrkdcP97313 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
PrkdcP97313 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
PrkdcP97313 Gm27838-201ENSMUST00000184829 128 ntBASIC10.89□□□□□ -0.67
PrkdcP97313 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PrkdcP97313 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PrkdcP97313 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PrkdcP97313 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC10.89□□□□□ -0.67
PrkdcP97313 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
PrkdcP97313 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
PrkdcP97313 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC10.88□□□□□ -0.67
PrkdcP97313 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC10.88□□□□□ -0.67
PrkdcP97313 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
PrkdcP97313 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
PrkdcP97313 Gm13517-201ENSMUST00000120782 1495 ntBASIC10.88□□□□□ -0.67
PrkdcP97313 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
PrkdcP97313 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
PrkdcP97313 Gm22189-201ENSMUST00000103822 86 ntBASIC10.88□□□□□ -0.67
PrkdcP97313 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
PrkdcP97313 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
PrkdcP97313 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
PrkdcP97313 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
PrkdcP97313 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms