Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H3f3aP84244 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
H3f3aP84244 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
H3f3aP84244 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
H3f3aP84244 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
H3f3aP84244 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.28□□□□□ -0.12
H3f3aP84244 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H3f3aP84244 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
H3f3aP84244 Gm15372-201ENSMUST00000120729 834 ntBASIC14.28□□□□□ -0.12
H3f3aP84244 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H3f3aP84244 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.28□□□□□ -0.12
H3f3aP84244 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
H3f3aP84244 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
H3f3aP84244 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
H3f3aP84244 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.28□□□□□ -0.12
H3f3aP84244 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
H3f3aP84244 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.28□□□□□ -0.12
H3f3aP84244 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H3f3aP84244 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H3f3aP84244 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H3f3aP84244 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H3f3aP84244 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H3f3aP84244 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.28□□□□□ -0.12
H3f3aP84244 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
H3f3aP84244 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
H3f3aP84244 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H3f3aP84244 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
H3f3aP84244 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H3f3aP84244 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H3f3aP84244 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
H3f3aP84244 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
H3f3aP84244 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.27□□□□□ -0.12
H3f3aP84244 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
H3f3aP84244 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
H3f3aP84244 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
H3f3aP84244 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.27□□□□□ -0.12
H3f3aP84244 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.27□□□□□ -0.12
H3f3aP84244 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
H3f3aP84244 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
H3f3aP84244 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
H3f3aP84244 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
H3f3aP84244 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
H3f3aP84244 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.27□□□□□ -0.13
H3f3aP84244 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.27□□□□□ -0.13
H3f3aP84244 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.27□□□□□ -0.13
H3f3aP84244 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.27□□□□□ -0.13
H3f3aP84244 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
H3f3aP84244 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
H3f3aP84244 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
H3f3aP84244 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
H3f3aP84244 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.27□□□□□ -0.13
H3f3aP84244 Gm44454-201ENSMUST00000198541 138 ntBASIC14.27□□□□□ -0.13
H3f3aP84244 Gm18669-201ENSMUST00000216049 778 ntBASIC14.27□□□□□ -0.13
H3f3aP84244 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.27□□□□□ -0.13
H3f3aP84244 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
H3f3aP84244 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
H3f3aP84244 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.27□□□□□ -0.13
H3f3aP84244 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H3f3aP84244 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
H3f3aP84244 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
H3f3aP84244 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
H3f3aP84244 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
H3f3aP84244 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H3f3aP84244 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H3f3aP84244 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
H3f3aP84244 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H3f3aP84244 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
H3f3aP84244 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H3f3aP84244 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H3f3aP84244 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
H3f3aP84244 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
H3f3aP84244 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H3f3aP84244 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H3f3aP84244 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
H3f3aP84244 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H3f3aP84244 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H3f3aP84244 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
H3f3aP84244 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.26□□□□□ -0.13
H3f3aP84244 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H3f3aP84244 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.26□□□□□ -0.13
H3f3aP84244 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.26□□□□□ -0.13
H3f3aP84244 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
H3f3aP84244 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
H3f3aP84244 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
H3f3aP84244 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
H3f3aP84244 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
H3f3aP84244 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
H3f3aP84244 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
H3f3aP84244 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H3f3aP84244 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
H3f3aP84244 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H3f3aP84244 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
H3f3aP84244 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H3f3aP84244 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H3f3aP84244 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.25□□□□□ -0.13
H3f3aP84244 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H3f3aP84244 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
H3f3aP84244 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H3f3aP84244 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
H3f3aP84244 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms