Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ybx1P62960 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Ybx1P62960 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Ybx1P62960 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Ybx1P62960 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ybx1P62960 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ybx1P62960 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ybx1P62960 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ybx1P62960 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ybx1P62960 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ybx1P62960 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Ybx1P62960 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.4■□□□□ 0.22
Ybx1P62960 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ybx1P62960 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ybx1P62960 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ybx1P62960 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ybx1P62960 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.4■□□□□ 0.22
Ybx1P62960 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ybx1P62960 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ybx1P62960 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Ybx1P62960 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ybx1P62960 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ybx1P62960 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ybx1P62960 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ybx1P62960 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.4■□□□□ 0.22
Ybx1P62960 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.4■□□□□ 0.22
Ybx1P62960 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ybx1P62960 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.4■□□□□ 0.22
Ybx1P62960 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ybx1P62960 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ybx1P62960 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ybx1P62960 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ybx1P62960 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Ybx1P62960 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ybx1P62960 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ybx1P62960 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ybx1P62960 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ybx1P62960 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ybx1P62960 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ybx1P62960 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ybx1P62960 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ybx1P62960 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Ybx1P62960 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ybx1P62960 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ybx1P62960 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.4■□□□□ 0.22
Ybx1P62960 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Ybx1P62960 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ybx1P62960 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ybx1P62960 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ybx1P62960 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ybx1P62960 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Ybx1P62960 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.39■□□□□ 0.21
Ybx1P62960 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ybx1P62960 Gm13216-201ENSMUST00000117145 591 ntBASIC16.39■□□□□ 0.21
Ybx1P62960 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ybx1P62960 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.39■□□□□ 0.21
Ybx1P62960 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.39■□□□□ 0.21
Ybx1P62960 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ybx1P62960 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ybx1P62960 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ybx1P62960 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ybx1P62960 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ybx1P62960 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ybx1P62960 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Ybx1P62960 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Ybx1P62960 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ybx1P62960 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ybx1P62960 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ybx1P62960 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Ybx1P62960 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Ybx1P62960 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ybx1P62960 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ybx1P62960 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.38■□□□□ 0.21
Ybx1P62960 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.38■□□□□ 0.21
Ybx1P62960 Gm25911-201ENSMUST00000157621 56 ntBASIC16.38■□□□□ 0.21
Ybx1P62960 Mir6404-201ENSMUST00000183699 94 ntBASIC16.38■□□□□ 0.21
Ybx1P62960 Gm27646-201ENSMUST00000183989 110 ntBASIC16.38■□□□□ 0.21
Ybx1P62960 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.38■□□□□ 0.21
Ybx1P62960 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.38■□□□□ 0.21
Ybx1P62960 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ybx1P62960 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Ybx1P62960 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ybx1P62960 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ybx1P62960 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ybx1P62960 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ybx1P62960 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Ybx1P62960 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ybx1P62960 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ybx1P62960 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ybx1P62960 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ybx1P62960 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ybx1P62960 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
Ybx1P62960 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC16.37■□□□□ 0.21
Ybx1P62960 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.37■□□□□ 0.21
Ybx1P62960 Gm5682-201ENSMUST00000173402 505 ntBASIC16.37■□□□□ 0.21
Ybx1P62960 Gm24513-201ENSMUST00000174964 138 ntBASIC16.37■□□□□ 0.21
Ybx1P62960 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.37■□□□□ 0.21
Ybx1P62960 Gm27397-201ENSMUST00000184997 107 ntBASIC16.37■□□□□ 0.21
Ybx1P62960 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.37■□□□□ 0.21
Ybx1P62960 Gm2756-201ENSMUST00000195851 400 ntBASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms