Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.72□□□□□ -0.05
Lsm3P62311 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lsm3P62311 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Lsm3P62311 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Lsm3P62311 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lsm3P62311 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Lsm3P62311 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lsm3P62311 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lsm3P62311 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.72□□□□□ -0.05
Lsm3P62311 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.72□□□□□ -0.05
Lsm3P62311 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.72□□□□□ -0.05
Lsm3P62311 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.72□□□□□ -0.05
Lsm3P62311 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm3P62311 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm3P62311 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm3P62311 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.71□□□□□ -0.05
Lsm3P62311 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm3P62311 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.71□□□□□ -0.05
Lsm3P62311 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm3P62311 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Lsm3P62311 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Lsm3P62311 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm3P62311 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.71□□□□□ -0.05
Lsm3P62311 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm3P62311 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm3P62311 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm3P62311 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC14.71□□□□□ -0.05
Lsm3P62311 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm3P62311 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC14.71□□□□□ -0.05
Lsm3P62311 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC14.71□□□□□ -0.05
Lsm3P62311 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm3P62311 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm3P62311 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm3P62311 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm3P62311 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.71□□□□□ -0.06
Lsm3P62311 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Lsm3P62311 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Lsm3P62311 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Lsm3P62311 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Lsm3P62311 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Lsm3P62311 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm3P62311 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.7□□□□□ -0.06
Lsm3P62311 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm3P62311 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm3P62311 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm3P62311 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm3P62311 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.7□□□□□ -0.06
Lsm3P62311 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm3P62311 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm3P62311 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC14.7□□□□□ -0.06
Lsm3P62311 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm3P62311 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
Lsm3P62311 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC14.7□□□□□ -0.06
Lsm3P62311 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.7□□□□□ -0.06
Lsm3P62311 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm3P62311 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm3P62311 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Lsm3P62311 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC14.7□□□□□ -0.06
Lsm3P62311 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC14.7□□□□□ -0.06
Lsm3P62311 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm3P62311 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Lsm3P62311 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm3P62311 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Lsm3P62311 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm3P62311 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Lsm3P62311 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm3P62311 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm3P62311 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm3P62311 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm3P62311 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm3P62311 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm3P62311 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Lsm3P62311 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Lsm3P62311 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.7□□□□□ -0.06
Lsm3P62311 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm3P62311 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm3P62311 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm3P62311 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm3P62311 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm3P62311 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm3P62311 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm3P62311 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm3P62311 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Lsm3P62311 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Lsm3P62311 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Lsm3P62311 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm3P62311 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm3P62311 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm3P62311 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm3P62311 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm3P62311 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm3P62311 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm3P62311 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm3P62311 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.69□□□□□ -0.06
Lsm3P62311 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC14.69□□□□□ -0.06
Lsm3P62311 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm3P62311 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm3P62311 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm3P62311 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Lsm3P62311 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms