Protein–RNA interactions for Protein: P61080

Ube2d1, Ubiquitin-conjugating enzyme E2 D1, mousemouse

Known RBP Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2d1P61080 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ube2d1P61080 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ube2d1P61080 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ube2d1P61080 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ube2d1P61080 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ube2d1P61080 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ube2d1P61080 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ube2d1P61080 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ube2d1P61080 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ube2d1P61080 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ube2d1P61080 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ube2d1P61080 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ube2d1P61080 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ube2d1P61080 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ube2d1P61080 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ube2d1P61080 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Ube2d1P61080 Wnt10b-204ENSMUST00000226655 1807 ntBASIC11.31□□□□□ -0.6
Ube2d1P61080 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ube2d1P61080 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC11.31□□□□□ -0.6
Ube2d1P61080 Gm18958-201ENSMUST00000174258 762 ntBASIC11.31□□□□□ -0.6
Ube2d1P61080 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ube2d1P61080 Gm43183-201ENSMUST00000200632 547 ntBASIC11.31□□□□□ -0.6
Ube2d1P61080 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ube2d1P61080 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ube2d1P61080 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC11.31□□□□□ -0.6
Ube2d1P61080 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC11.31□□□□□ -0.6
Ube2d1P61080 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ube2d1P61080 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ube2d1P61080 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ube2d1P61080 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ube2d1P61080 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ube2d1P61080 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ube2d1P61080 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ube2d1P61080 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ube2d1P61080 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ube2d1P61080 Gm10676-201ENSMUST00000098778 3221 ntBASIC11.31□□□□□ -0.6
Ube2d1P61080 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ube2d1P61080 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ube2d1P61080 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ube2d1P61080 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ube2d1P61080 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ube2d1P61080 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ube2d1P61080 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ube2d1P61080 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ube2d1P61080 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ube2d1P61080 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ube2d1P61080 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC11.3□□□□□ -0.6
Ube2d1P61080 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ube2d1P61080 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ube2d1P61080 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Ube2d1P61080 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ube2d1P61080 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ube2d1P61080 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ube2d1P61080 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ube2d1P61080 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Ube2d1P61080 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ube2d1P61080 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ube2d1P61080 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC11.3□□□□□ -0.6
Ube2d1P61080 Gm18666-201ENSMUST00000190039 958 ntBASIC11.3□□□□□ -0.6
Ube2d1P61080 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC11.3□□□□□ -0.6
Ube2d1P61080 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Ube2d1P61080 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ube2d1P61080 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ube2d1P61080 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ube2d1P61080 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ube2d1P61080 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ube2d1P61080 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Ube2d1P61080 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ube2d1P61080 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC11.3□□□□□ -0.6
Ube2d1P61080 Gm27528-202ENSMUST00000222916 2012 ntBASIC11.3□□□□□ -0.6
Ube2d1P61080 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ube2d1P61080 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ube2d1P61080 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ube2d1P61080 AC124581.1-201ENSMUST00000225416 1399 ntBASIC11.29□□□□□ -0.6
Ube2d1P61080 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ube2d1P61080 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ube2d1P61080 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ube2d1P61080 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ube2d1P61080 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ube2d1P61080 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Ube2d1P61080 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ube2d1P61080 AC174678.1-201ENSMUST00000228007 2749 ntBASIC11.29□□□□□ -0.6
Ube2d1P61080 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ube2d1P61080 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Ube2d1P61080 Gm27275-201ENSMUST00000184318 272 ntBASIC11.29□□□□□ -0.6
Ube2d1P61080 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ube2d1P61080 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC11.29□□□□□ -0.6
Ube2d1P61080 AC120002.2-201ENSMUST00000220205 773 ntBASIC11.29□□□□□ -0.6
Ube2d1P61080 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC11.29□□□□□ -0.6
Ube2d1P61080 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Ube2d1P61080 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Ube2d1P61080 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ube2d1P61080 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ube2d1P61080 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ube2d1P61080 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Ube2d1P61080 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ube2d1P61080 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC11.29□□□□□ -0.6
Ube2d1P61080 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ube2d1P61080 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ube2d1P61080 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms