Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pdx1P52946 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pdx1P52946 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.88■□□□□ 0.13
Pdx1P52946 Gm17807-201ENSMUST00000186869 298 ntBASIC15.88■□□□□ 0.13
Pdx1P52946 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.88■□□□□ 0.13
Pdx1P52946 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pdx1P52946 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pdx1P52946 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pdx1P52946 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pdx1P52946 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pdx1P52946 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pdx1P52946 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.88■□□□□ 0.13
Pdx1P52946 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pdx1P52946 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pdx1P52946 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.88■□□□□ 0.13
Pdx1P52946 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Pdx1P52946 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.88■□□□□ 0.13
Pdx1P52946 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pdx1P52946 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pdx1P52946 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pdx1P52946 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pdx1P52946 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pdx1P52946 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.87■□□□□ 0.13
Pdx1P52946 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Pdx1P52946 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pdx1P52946 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Pdx1P52946 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.87■□□□□ 0.13
Pdx1P52946 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Pdx1P52946 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pdx1P52946 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Pdx1P52946 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pdx1P52946 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pdx1P52946 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Pdx1P52946 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pdx1P52946 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pdx1P52946 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pdx1P52946 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pdx1P52946 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pdx1P52946 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pdx1P52946 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pdx1P52946 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pdx1P52946 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pdx1P52946 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pdx1P52946 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pdx1P52946 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pdx1P52946 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pdx1P52946 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pdx1P52946 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pdx1P52946 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Pdx1P52946 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pdx1P52946 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pdx1P52946 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pdx1P52946 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pdx1P52946 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.86■□□□□ 0.13
Pdx1P52946 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Pdx1P52946 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pdx1P52946 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pdx1P52946 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.86■□□□□ 0.13
Pdx1P52946 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pdx1P52946 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.86■□□□□ 0.13
Pdx1P52946 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.86■□□□□ 0.13
Pdx1P52946 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.86■□□□□ 0.13
Pdx1P52946 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pdx1P52946 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pdx1P52946 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.86■□□□□ 0.13
Pdx1P52946 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pdx1P52946 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pdx1P52946 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pdx1P52946 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pdx1P52946 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pdx1P52946 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pdx1P52946 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Pdx1P52946 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pdx1P52946 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pdx1P52946 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pdx1P52946 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pdx1P52946 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pdx1P52946 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pdx1P52946 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pdx1P52946 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.85■□□□□ 0.13
Pdx1P52946 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pdx1P52946 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Pdx1P52946 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.85■□□□□ 0.13
Pdx1P52946 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pdx1P52946 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pdx1P52946 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Pdx1P52946 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pdx1P52946 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Pdx1P52946 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pdx1P52946 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Pdx1P52946 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pdx1P52946 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Pdx1P52946 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pdx1P52946 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Pdx1P52946 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pdx1P52946 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Pdx1P52946 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pdx1P52946 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Pdx1P52946 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.84■□□□□ 0.13
Pdx1P52946 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms