Protein–RNA interactions for Protein: P48985

Atoh1, Protein atonal homolog 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atoh1P48985 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atoh1P48985 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atoh1P48985 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Atoh1P48985 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Atoh1P48985 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atoh1P48985 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atoh1P48985 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Atoh1P48985 Nrn1-204ENSMUST00000224323 1779 ntBASIC18.09■□□□□ 0.49
Atoh1P48985 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atoh1P48985 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atoh1P48985 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atoh1P48985 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atoh1P48985 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atoh1P48985 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC18.09■□□□□ 0.49
Atoh1P48985 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Atoh1P48985 Gm5177-201ENSMUST00000183092 997 ntBASIC18.09■□□□□ 0.49
Atoh1P48985 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC18.09■□□□□ 0.49
Atoh1P48985 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Atoh1P48985 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atoh1P48985 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atoh1P48985 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Atoh1P48985 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Atoh1P48985 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Atoh1P48985 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Atoh1P48985 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Atoh1P48985 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Atoh1P48985 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Atoh1P48985 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC18.08■□□□□ 0.49
Atoh1P48985 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Atoh1P48985 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Atoh1P48985 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Atoh1P48985 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Atoh1P48985 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Atoh1P48985 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Atoh1P48985 Gm38318-201ENSMUST00000195769 1706 ntBASIC18.08■□□□□ 0.48
Atoh1P48985 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Atoh1P48985 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Atoh1P48985 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
Atoh1P48985 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Atoh1P48985 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Atoh1P48985 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Atoh1P48985 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Atoh1P48985 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Atoh1P48985 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC18.07■□□□□ 0.48
Atoh1P48985 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.07■□□□□ 0.48
Atoh1P48985 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Atoh1P48985 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Atoh1P48985 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Atoh1P48985 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Atoh1P48985 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Atoh1P48985 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Atoh1P48985 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Atoh1P48985 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Atoh1P48985 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Atoh1P48985 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Atoh1P48985 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Atoh1P48985 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Atoh1P48985 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Atoh1P48985 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atoh1P48985 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atoh1P48985 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atoh1P48985 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atoh1P48985 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atoh1P48985 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atoh1P48985 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC18.06■□□□□ 0.48
Atoh1P48985 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atoh1P48985 Gm13294-201ENSMUST00000121757 1330 ntBASIC18.06■□□□□ 0.48
Atoh1P48985 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Atoh1P48985 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC18.06■□□□□ 0.48
Atoh1P48985 Gm11745-201ENSMUST00000121669 448 ntBASIC18.06■□□□□ 0.48
Atoh1P48985 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Atoh1P48985 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atoh1P48985 Mir7023-201ENSMUST00000185093 64 ntBASIC18.06■□□□□ 0.48
Atoh1P48985 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC18.06■□□□□ 0.48
Atoh1P48985 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.06■□□□□ 0.48
Atoh1P48985 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC18.06■□□□□ 0.48
Atoh1P48985 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Atoh1P48985 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atoh1P48985 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atoh1P48985 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atoh1P48985 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Atoh1P48985 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC18.06■□□□□ 0.48
Atoh1P48985 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atoh1P48985 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Atoh1P48985 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atoh1P48985 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.06■□□□□ 0.48
Atoh1P48985 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Atoh1P48985 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atoh1P48985 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atoh1P48985 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Atoh1P48985 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Atoh1P48985 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atoh1P48985 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
Atoh1P48985 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atoh1P48985 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Atoh1P48985 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Atoh1P48985 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atoh1P48985 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Atoh1P48985 Fgf17-202ENSMUST00000227123 1336 ntBASIC18.05■□□□□ 0.48
Atoh1P48985 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms