Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfx3P48381 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfx3P48381 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.53□□□□□ -0.08
Rfx3P48381 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rfx3P48381 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rfx3P48381 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.52□□□□□ -0.08
Rfx3P48381 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rfx3P48381 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Rfx3P48381 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Rfx3P48381 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rfx3P48381 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rfx3P48381 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rfx3P48381 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rfx3P48381 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.52□□□□□ -0.08
Rfx3P48381 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rfx3P48381 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rfx3P48381 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rfx3P48381 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rfx3P48381 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Rfx3P48381 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.52□□□□□ -0.09
Rfx3P48381 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.52□□□□□ -0.09
Rfx3P48381 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.52□□□□□ -0.09
Rfx3P48381 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rfx3P48381 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.52□□□□□ -0.09
Rfx3P48381 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.52□□□□□ -0.09
Rfx3P48381 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.52□□□□□ -0.09
Rfx3P48381 Gm45058-201ENSMUST00000205810 766 ntBASIC14.52□□□□□ -0.09
Rfx3P48381 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rfx3P48381 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rfx3P48381 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rfx3P48381 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rfx3P48381 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.52□□□□□ -0.09
Rfx3P48381 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rfx3P48381 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Rfx3P48381 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rfx3P48381 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rfx3P48381 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.51□□□□□ -0.09
Rfx3P48381 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx3P48381 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx3P48381 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx3P48381 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx3P48381 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx3P48381 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
Rfx3P48381 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx3P48381 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx3P48381 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.51□□□□□ -0.09
Rfx3P48381 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx3P48381 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Rfx3P48381 Gm7889-201ENSMUST00000185591 958 ntBASIC14.51□□□□□ -0.09
Rfx3P48381 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.51□□□□□ -0.09
Rfx3P48381 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx3P48381 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx3P48381 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx3P48381 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx3P48381 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Rfx3P48381 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx3P48381 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx3P48381 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx3P48381 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx3P48381 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx3P48381 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx3P48381 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.51□□□□□ -0.09
Rfx3P48381 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx3P48381 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx3P48381 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.51□□□□□ -0.09
Rfx3P48381 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx3P48381 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx3P48381 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx3P48381 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx3P48381 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Rfx3P48381 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfx3P48381 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
Rfx3P48381 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rfx3P48381 Asic1-205ENSMUST00000228185 1818 ntBASIC14.5□□□□□ -0.09
Rfx3P48381 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfx3P48381 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfx3P48381 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
Rfx3P48381 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfx3P48381 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfx3P48381 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfx3P48381 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rfx3P48381 Gm15565-201ENSMUST00000118890 427 ntBASIC14.5□□□□□ -0.09
Rfx3P48381 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rfx3P48381 Mir1668-201ENSMUST00000184114 107 ntBASIC14.5□□□□□ -0.09
Rfx3P48381 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.5□□□□□ -0.09
Rfx3P48381 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
Rfx3P48381 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfx3P48381 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfx3P48381 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfx3P48381 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Rfx3P48381 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Rfx3P48381 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfx3P48381 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rfx3P48381 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfx3P48381 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rfx3P48381 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfx3P48381 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Rfx3P48381 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.5□□□□□ -0.09
Rfx3P48381 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfx3P48381 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms