Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-2P42586 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Nkx2-2P42586 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-2P42586 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
Nkx2-2P42586 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-2P42586 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-2P42586 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-2P42586 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-2P42586 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-2P42586 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-2P42586 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Nkx2-2P42586 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-2P42586 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-2P42586 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-2P42586 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Nkx2-2P42586 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-2P42586 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-2P42586 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Nkx2-2P42586 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.72□□□□□ -0.05
Nkx2-2P42586 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.72□□□□□ -0.05
Nkx2-2P42586 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-2P42586 Gm27357-201ENSMUST00000183754 135 ntBASIC14.72□□□□□ -0.05
Nkx2-2P42586 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.72□□□□□ -0.05
Nkx2-2P42586 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.72□□□□□ -0.05
Nkx2-2P42586 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Nkx2-2P42586 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-2P42586 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Nkx2-2P42586 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.72□□□□□ -0.05
Nkx2-2P42586 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-2P42586 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Nkx2-2P42586 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-2P42586 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-2P42586 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-2P42586 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-2P42586 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx2-2P42586 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx2-2P42586 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx2-2P42586 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.71□□□□□ -0.05
Nkx2-2P42586 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx2-2P42586 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.71□□□□□ -0.05
Nkx2-2P42586 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.71□□□□□ -0.05
Nkx2-2P42586 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Nkx2-2P42586 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx2-2P42586 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx2-2P42586 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx2-2P42586 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx2-2P42586 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.71□□□□□ -0.05
Nkx2-2P42586 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx2-2P42586 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Nkx2-2P42586 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx2-2P42586 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx2-2P42586 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.71□□□□□ -0.05
Nkx2-2P42586 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Nkx2-2P42586 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Nkx2-2P42586 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Nkx2-2P42586 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Nkx2-2P42586 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Nkx2-2P42586 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Nkx2-2P42586 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Nkx2-2P42586 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx2-2P42586 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx2-2P42586 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx2-2P42586 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx2-2P42586 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Nkx2-2P42586 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx2-2P42586 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.7□□□□□ -0.06
Nkx2-2P42586 Gm14859-201ENSMUST00000117752 357 ntBASIC14.7□□□□□ -0.06
Nkx2-2P42586 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx2-2P42586 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx2-2P42586 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.7□□□□□ -0.06
Nkx2-2P42586 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.7□□□□□ -0.06
Nkx2-2P42586 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.7□□□□□ -0.06
Nkx2-2P42586 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.7□□□□□ -0.06
Nkx2-2P42586 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.7□□□□□ -0.06
Nkx2-2P42586 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx2-2P42586 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx2-2P42586 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx2-2P42586 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx2-2P42586 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx2-2P42586 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx2-2P42586 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx2-2P42586 Dancr-204ENSMUST00000132389 2347 ntBASIC14.7□□□□□ -0.06
Nkx2-2P42586 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.7□□□□□ -0.06
Nkx2-2P42586 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx2-2P42586 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Nkx2-2P42586 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-2P42586 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-2P42586 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-2P42586 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
Nkx2-2P42586 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.69□□□□□ -0.06
Nkx2-2P42586 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.69□□□□□ -0.06
Nkx2-2P42586 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.69□□□□□ -0.06
Nkx2-2P42586 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-2P42586 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.69□□□□□ -0.06
Nkx2-2P42586 Gm44454-201ENSMUST00000198541 138 ntBASIC14.69□□□□□ -0.06
Nkx2-2P42586 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-2P42586 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-2P42586 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-2P42586 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-2P42586 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms