Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LdlrP35951 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
LdlrP35951 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LdlrP35951 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.99■□□□□ 0.15
LdlrP35951 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.99■□□□□ 0.15
LdlrP35951 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LdlrP35951 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.99■□□□□ 0.15
LdlrP35951 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LdlrP35951 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LdlrP35951 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LdlrP35951 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LdlrP35951 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LdlrP35951 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.98■□□□□ 0.15
LdlrP35951 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
LdlrP35951 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LdlrP35951 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LdlrP35951 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
LdlrP35951 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.98■□□□□ 0.15
LdlrP35951 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
LdlrP35951 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LdlrP35951 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LdlrP35951 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.98■□□□□ 0.15
LdlrP35951 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LdlrP35951 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LdlrP35951 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LdlrP35951 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LdlrP35951 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.98■□□□□ 0.15
LdlrP35951 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.98■□□□□ 0.15
LdlrP35951 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LdlrP35951 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LdlrP35951 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LdlrP35951 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.97■□□□□ 0.15
LdlrP35951 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LdlrP35951 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LdlrP35951 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LdlrP35951 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.97■□□□□ 0.15
LdlrP35951 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LdlrP35951 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LdlrP35951 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LdlrP35951 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LdlrP35951 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LdlrP35951 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LdlrP35951 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
LdlrP35951 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
LdlrP35951 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LdlrP35951 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.97■□□□□ 0.15
LdlrP35951 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LdlrP35951 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LdlrP35951 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.97■□□□□ 0.15
LdlrP35951 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LdlrP35951 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LdlrP35951 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LdlrP35951 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LdlrP35951 Asic1-205ENSMUST00000228185 1818 ntBASIC15.96■□□□□ 0.15
LdlrP35951 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LdlrP35951 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LdlrP35951 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LdlrP35951 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LdlrP35951 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LdlrP35951 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LdlrP35951 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LdlrP35951 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LdlrP35951 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LdlrP35951 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LdlrP35951 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.96■□□□□ 0.15
LdlrP35951 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
LdlrP35951 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.96■□□□□ 0.15
LdlrP35951 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LdlrP35951 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LdlrP35951 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.96■□□□□ 0.15
LdlrP35951 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.96■□□□□ 0.15
LdlrP35951 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LdlrP35951 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.96■□□□□ 0.15
LdlrP35951 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
LdlrP35951 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
LdlrP35951 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
LdlrP35951 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
LdlrP35951 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
LdlrP35951 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
LdlrP35951 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LdlrP35951 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LdlrP35951 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LdlrP35951 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LdlrP35951 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LdlrP35951 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
LdlrP35951 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LdlrP35951 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LdlrP35951 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
LdlrP35951 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LdlrP35951 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LdlrP35951 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.95■□□□□ 0.14
LdlrP35951 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.95■□□□□ 0.14
LdlrP35951 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LdlrP35951 Gm18115-201ENSMUST00000221209 621 ntBASIC15.95■□□□□ 0.14
LdlrP35951 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LdlrP35951 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LdlrP35951 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LdlrP35951 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
LdlrP35951 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LdlrP35951 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms