Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.78□□□□□ -0.04
Sftpa1P35242 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sftpa1P35242 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sftpa1P35242 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sftpa1P35242 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sftpa1P35242 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sftpa1P35242 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sftpa1P35242 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sftpa1P35242 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sftpa1P35242 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sftpa1P35242 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Sftpa1P35242 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
Sftpa1P35242 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.77□□□□□ -0.04
Sftpa1P35242 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sftpa1P35242 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sftpa1P35242 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Sftpa1P35242 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sftpa1P35242 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.77□□□□□ -0.05
Sftpa1P35242 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.05
Sftpa1P35242 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.77□□□□□ -0.05
Sftpa1P35242 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.77□□□□□ -0.05
Sftpa1P35242 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.77□□□□□ -0.05
Sftpa1P35242 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.77□□□□□ -0.05
Sftpa1P35242 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.77□□□□□ -0.05
Sftpa1P35242 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.77□□□□□ -0.05
Sftpa1P35242 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sftpa1P35242 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.77□□□□□ -0.05
Sftpa1P35242 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.77□□□□□ -0.05
Sftpa1P35242 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.77□□□□□ -0.05
Sftpa1P35242 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.77□□□□□ -0.05
Sftpa1P35242 Gm8825-201ENSMUST00000182565 998 ntBASIC14.77□□□□□ -0.05
Sftpa1P35242 Gm4518-201ENSMUST00000182638 718 ntBASIC14.77□□□□□ -0.05
Sftpa1P35242 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.77□□□□□ -0.05
Sftpa1P35242 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.77□□□□□ -0.05
Sftpa1P35242 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.77□□□□□ -0.05
Sftpa1P35242 Mir6956-201ENSMUST00000183598 62 ntBASIC14.77□□□□□ -0.05
Sftpa1P35242 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.77□□□□□ -0.05
Sftpa1P35242 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Sftpa1P35242 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sftpa1P35242 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sftpa1P35242 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sftpa1P35242 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.77□□□□□ -0.05
Sftpa1P35242 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.77□□□□□ -0.05
Sftpa1P35242 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.77□□□□□ -0.05
Sftpa1P35242 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Sftpa1P35242 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Sftpa1P35242 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sftpa1P35242 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.77□□□□□ -0.05
Sftpa1P35242 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sftpa1P35242 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sftpa1P35242 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sftpa1P35242 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sftpa1P35242 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sftpa1P35242 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sftpa1P35242 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Sftpa1P35242 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sftpa1P35242 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sftpa1P35242 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sftpa1P35242 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sftpa1P35242 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sftpa1P35242 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.76□□□□□ -0.05
Sftpa1P35242 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sftpa1P35242 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sftpa1P35242 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.76□□□□□ -0.05
Sftpa1P35242 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sftpa1P35242 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sftpa1P35242 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sftpa1P35242 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Sftpa1P35242 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sftpa1P35242 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sftpa1P35242 Gm11025-201ENSMUST00000140773 466 ntBASIC14.76□□□□□ -0.05
Sftpa1P35242 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.76□□□□□ -0.05
Sftpa1P35242 Mir6404-201ENSMUST00000183699 94 ntBASIC14.76□□□□□ -0.05
Sftpa1P35242 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.76□□□□□ -0.05
Sftpa1P35242 Gm44492-201ENSMUST00000197012 141 ntBASIC14.76□□□□□ -0.05
Sftpa1P35242 Gm44872-201ENSMUST00000207864 420 ntBASIC14.76□□□□□ -0.05
Sftpa1P35242 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sftpa1P35242 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sftpa1P35242 Gm8396-201ENSMUST00000057361 823 ntBASIC14.76□□□□□ -0.05
Sftpa1P35242 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.76□□□□□ -0.05
Sftpa1P35242 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.76□□□□□ -0.05
Sftpa1P35242 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sftpa1P35242 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sftpa1P35242 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sftpa1P35242 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sftpa1P35242 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sftpa1P35242 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sftpa1P35242 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Sftpa1P35242 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sftpa1P35242 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.75□□□□□ -0.05
Sftpa1P35242 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sftpa1P35242 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sftpa1P35242 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sftpa1P35242 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sftpa1P35242 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sftpa1P35242 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Sftpa1P35242 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.75□□□□□ -0.05
Sftpa1P35242 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sftpa1P35242 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.75□□□□□ -0.05
Sftpa1P35242 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms