Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.2□□□□□ -0.14
Cd28P31041 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Cd28P31041 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Cd28P31041 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.2□□□□□ -0.14
Cd28P31041 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cd28P31041 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Cd28P31041 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cd28P31041 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.2□□□□□ -0.14
Cd28P31041 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Cd28P31041 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.2□□□□□ -0.14
Cd28P31041 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cd28P31041 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cd28P31041 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cd28P31041 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cd28P31041 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.2□□□□□ -0.14
Cd28P31041 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cd28P31041 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cd28P31041 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cd28P31041 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cd28P31041 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cd28P31041 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cd28P31041 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cd28P31041 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cd28P31041 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cd28P31041 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cd28P31041 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cd28P31041 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cd28P31041 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cd28P31041 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cd28P31041 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC14.19□□□□□ -0.14
Cd28P31041 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC14.19□□□□□ -0.14
Cd28P31041 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cd28P31041 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cd28P31041 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cd28P31041 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cd28P31041 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cd28P31041 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cd28P31041 Actl10-202ENSMUST00000226583 1501 ntBASIC14.19□□□□□ -0.14
Cd28P31041 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cd28P31041 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cd28P31041 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.19□□□□□ -0.14
Cd28P31041 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cd28P31041 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cd28P31041 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cd28P31041 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cd28P31041 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cd28P31041 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cd28P31041 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cd28P31041 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cd28P31041 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cd28P31041 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cd28P31041 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cd28P31041 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.18□□□□□ -0.14
Cd28P31041 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cd28P31041 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cd28P31041 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cd28P31041 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cd28P31041 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cd28P31041 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Cd28P31041 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.18□□□□□ -0.14
Cd28P31041 Gm38027-201ENSMUST00000192315 235 ntBASIC14.18□□□□□ -0.14
Cd28P31041 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cd28P31041 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cd28P31041 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
Cd28P31041 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Cd28P31041 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cd28P31041 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cd28P31041 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cd28P31041 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cd28P31041 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cd28P31041 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Cd28P31041 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.18□□□□□ -0.14
Cd28P31041 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cd28P31041 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cd28P31041 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cd28P31041 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd28P31041 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.17□□□□□ -0.14
Cd28P31041 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd28P31041 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd28P31041 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd28P31041 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.17□□□□□ -0.14
Cd28P31041 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd28P31041 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd28P31041 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cd28P31041 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd28P31041 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.17□□□□□ -0.14
Cd28P31041 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd28P31041 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd28P31041 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Cd28P31041 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC14.17□□□□□ -0.14
Cd28P31041 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.17□□□□□ -0.14
Cd28P31041 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd28P31041 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC14.17□□□□□ -0.14
Cd28P31041 Gm20049-201ENSMUST00000219950 730 ntBASIC14.17□□□□□ -0.14
Cd28P31041 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd28P31041 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cd28P31041 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Cd28P31041 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cd28P31041 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Cd28P31041 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms