Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nedd8P29595 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nedd8P29595 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nedd8P29595 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nedd8P29595 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Nedd8P29595 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nedd8P29595 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nedd8P29595 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nedd8P29595 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nedd8P29595 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nedd8P29595 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Nedd8P29595 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nedd8P29595 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nedd8P29595 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Nedd8P29595 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.92□□□□□ -0.02
Nedd8P29595 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC14.92□□□□□ -0.02
Nedd8P29595 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nedd8P29595 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC14.92□□□□□ -0.02
Nedd8P29595 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nedd8P29595 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nedd8P29595 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Nedd8P29595 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.92□□□□□ -0.02
Nedd8P29595 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nedd8P29595 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nedd8P29595 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nedd8P29595 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nedd8P29595 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nedd8P29595 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nedd8P29595 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nedd8P29595 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nedd8P29595 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nedd8P29595 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nedd8P29595 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.92□□□□□ -0.02
Nedd8P29595 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nedd8P29595 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nedd8P29595 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nedd8P29595 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.92□□□□□ -0.02
Nedd8P29595 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nedd8P29595 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Nedd8P29595 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nedd8P29595 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nedd8P29595 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nedd8P29595 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nedd8P29595 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.91□□□□□ -0.02
Nedd8P29595 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.91□□□□□ -0.02
Nedd8P29595 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Nedd8P29595 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.91□□□□□ -0.02
Nedd8P29595 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nedd8P29595 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nedd8P29595 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nedd8P29595 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Nedd8P29595 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nedd8P29595 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nedd8P29595 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC14.91□□□□□ -0.02
Nedd8P29595 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nedd8P29595 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Nedd8P29595 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.91□□□□□ -0.02
Nedd8P29595 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Nedd8P29595 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.91□□□□□ -0.02
Nedd8P29595 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nedd8P29595 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nedd8P29595 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.91□□□□□ -0.02
Nedd8P29595 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nedd8P29595 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Nedd8P29595 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nedd8P29595 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nedd8P29595 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Nedd8P29595 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nedd8P29595 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nedd8P29595 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Nedd8P29595 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Nedd8P29595 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Nedd8P29595 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Nedd8P29595 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.9□□□□□ -0.02
Nedd8P29595 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nedd8P29595 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Nedd8P29595 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nedd8P29595 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Nedd8P29595 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nedd8P29595 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nedd8P29595 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Nedd8P29595 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC14.9□□□□□ -0.02
Nedd8P29595 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nedd8P29595 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Nedd8P29595 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nedd8P29595 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Nedd8P29595 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC14.9□□□□□ -0.02
Nedd8P29595 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Nedd8P29595 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Nedd8P29595 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nedd8P29595 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nedd8P29595 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nedd8P29595 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Nedd8P29595 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nedd8P29595 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nedd8P29595 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nedd8P29595 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Nedd8P29595 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nedd8P29595 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Nedd8P29595 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms