Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nfkb1P25799 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Nfkb1P25799 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nfkb1P25799 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nfkb1P25799 Gm8097-201ENSMUST00000117903 829 ntBASIC16.45■□□□□ 0.22
Nfkb1P25799 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nfkb1P25799 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.45■□□□□ 0.22
Nfkb1P25799 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nfkb1P25799 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Nfkb1P25799 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nfkb1P25799 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.45■□□□□ 0.22
Nfkb1P25799 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nfkb1P25799 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Nfkb1P25799 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nfkb1P25799 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Nfkb1P25799 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
Nfkb1P25799 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nfkb1P25799 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nfkb1P25799 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nfkb1P25799 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nfkb1P25799 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nfkb1P25799 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nfkb1P25799 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nfkb1P25799 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nfkb1P25799 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nfkb1P25799 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nfkb1P25799 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nfkb1P25799 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nfkb1P25799 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nfkb1P25799 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nfkb1P25799 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nfkb1P25799 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nfkb1P25799 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nfkb1P25799 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.44■□□□□ 0.22
Nfkb1P25799 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nfkb1P25799 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.44■□□□□ 0.22
Nfkb1P25799 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nfkb1P25799 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.44■□□□□ 0.22
Nfkb1P25799 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nfkb1P25799 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nfkb1P25799 Gm25990-201ENSMUST00000102440 86 ntBASIC16.44■□□□□ 0.22
Nfkb1P25799 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.44■□□□□ 0.22
Nfkb1P25799 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.44■□□□□ 0.22
Nfkb1P25799 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.44■□□□□ 0.22
Nfkb1P25799 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nfkb1P25799 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nfkb1P25799 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nfkb1P25799 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nfkb1P25799 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nfkb1P25799 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nfkb1P25799 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nfkb1P25799 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nfkb1P25799 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Nfkb1P25799 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nfkb1P25799 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nfkb1P25799 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nfkb1P25799 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nfkb1P25799 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nfkb1P25799 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nfkb1P25799 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nfkb1P25799 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.43■□□□□ 0.22
Nfkb1P25799 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nfkb1P25799 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nfkb1P25799 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nfkb1P25799 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.43■□□□□ 0.22
Nfkb1P25799 Gm18206-201ENSMUST00000207027 926 ntBASIC16.43■□□□□ 0.22
Nfkb1P25799 Gm9172-201ENSMUST00000212092 954 ntBASIC16.43■□□□□ 0.22
Nfkb1P25799 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nfkb1P25799 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.43■□□□□ 0.22
Nfkb1P25799 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nfkb1P25799 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nfkb1P25799 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nfkb1P25799 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nfkb1P25799 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nfkb1P25799 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nfkb1P25799 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nfkb1P25799 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nfkb1P25799 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nfkb1P25799 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nfkb1P25799 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nfkb1P25799 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nfkb1P25799 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nfkb1P25799 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Nfkb1P25799 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nfkb1P25799 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nfkb1P25799 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nfkb1P25799 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Nfkb1P25799 Mir6404-201ENSMUST00000183699 94 ntBASIC16.42■□□□□ 0.22
Nfkb1P25799 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.42■□□□□ 0.22
Nfkb1P25799 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.42■□□□□ 0.22
Nfkb1P25799 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nfkb1P25799 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nfkb1P25799 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nfkb1P25799 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nfkb1P25799 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nfkb1P25799 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Nfkb1P25799 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Nfkb1P25799 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nfkb1P25799 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nfkb1P25799 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms