Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pde6bP23440 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pde6bP23440 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pde6bP23440 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pde6bP23440 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pde6bP23440 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Pde6bP23440 Gm12350-201ENSMUST00000121208 462 ntBASIC17.48■□□□□ 0.39
Pde6bP23440 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
Pde6bP23440 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.48■□□□□ 0.39
Pde6bP23440 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.48■□□□□ 0.39
Pde6bP23440 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.48■□□□□ 0.39
Pde6bP23440 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Pde6bP23440 Gm7506-201ENSMUST00000207758 815 ntBASIC17.48■□□□□ 0.39
Pde6bP23440 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pde6bP23440 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.48■□□□□ 0.39
Pde6bP23440 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Pde6bP23440 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pde6bP23440 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Pde6bP23440 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pde6bP23440 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pde6bP23440 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pde6bP23440 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pde6bP23440 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pde6bP23440 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pde6bP23440 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pde6bP23440 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pde6bP23440 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pde6bP23440 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pde6bP23440 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pde6bP23440 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pde6bP23440 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.47■□□□□ 0.39
Pde6bP23440 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pde6bP23440 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pde6bP23440 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pde6bP23440 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pde6bP23440 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pde6bP23440 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.47■□□□□ 0.39
Pde6bP23440 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pde6bP23440 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pde6bP23440 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.47■□□□□ 0.39
Pde6bP23440 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pde6bP23440 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.47■□□□□ 0.39
Pde6bP23440 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.47■□□□□ 0.39
Pde6bP23440 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pde6bP23440 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pde6bP23440 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pde6bP23440 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pde6bP23440 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.47■□□□□ 0.39
Pde6bP23440 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pde6bP23440 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pde6bP23440 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pde6bP23440 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pde6bP23440 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pde6bP23440 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pde6bP23440 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pde6bP23440 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.46■□□□□ 0.39
Pde6bP23440 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pde6bP23440 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pde6bP23440 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Pde6bP23440 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pde6bP23440 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pde6bP23440 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pde6bP23440 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pde6bP23440 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pde6bP23440 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.46■□□□□ 0.39
Pde6bP23440 Gm4535-201ENSMUST00000182274 558 ntBASIC17.46■□□□□ 0.39
Pde6bP23440 Gm37935-201ENSMUST00000192012 982 ntBASIC17.46■□□□□ 0.39
Pde6bP23440 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.46■□□□□ 0.39
Pde6bP23440 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pde6bP23440 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pde6bP23440 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pde6bP23440 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pde6bP23440 Gm10355-201ENSMUST00000097146 517 ntBASIC17.46■□□□□ 0.39
Pde6bP23440 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pde6bP23440 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pde6bP23440 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pde6bP23440 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.46■□□□□ 0.39
Pde6bP23440 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pde6bP23440 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pde6bP23440 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Pde6bP23440 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Pde6bP23440 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Pde6bP23440 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Pde6bP23440 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.45■□□□□ 0.38
Pde6bP23440 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.45■□□□□ 0.38
Pde6bP23440 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Pde6bP23440 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pde6bP23440 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pde6bP23440 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.45■□□□□ 0.38
Pde6bP23440 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.45■□□□□ 0.38
Pde6bP23440 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pde6bP23440 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.45■□□□□ 0.38
Pde6bP23440 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.45■□□□□ 0.38
Pde6bP23440 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pde6bP23440 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.45■□□□□ 0.38
Pde6bP23440 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pde6bP23440 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pde6bP23440 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pde6bP23440 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pde6bP23440 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms