Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
P06344 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P06344 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P06344 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.28□□□□□ -0.12
P06344 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.28□□□□□ -0.12
P06344 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.28□□□□□ -0.12
P06344 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
P06344 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
P06344 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.28□□□□□ -0.12
P06344 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
P06344 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.28□□□□□ -0.12
P06344 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.28□□□□□ -0.12
P06344 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P06344 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P06344 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.28□□□□□ -0.12
P06344 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P06344 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P06344 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
P06344 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P06344 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P06344 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P06344 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
P06344 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
P06344 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P06344 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
P06344 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P06344 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
P06344 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
P06344 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
P06344 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.27□□□□□ -0.12
P06344 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
P06344 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
P06344 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
P06344 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
P06344 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
P06344 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
P06344 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
P06344 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
P06344 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
P06344 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
P06344 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
P06344 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
P06344 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
P06344 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
P06344 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
P06344 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
P06344 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.27□□□□□ -0.13
P06344 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
P06344 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
P06344 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
P06344 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.27□□□□□ -0.13
P06344 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.27□□□□□ -0.13
P06344 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.27□□□□□ -0.13
P06344 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
P06344 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
P06344 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.27□□□□□ -0.13
P06344 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
P06344 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
P06344 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
P06344 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
P06344 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
P06344 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
P06344 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
P06344 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
P06344 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
P06344 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.26□□□□□ -0.13
P06344 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
P06344 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P06344 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
P06344 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
P06344 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.26□□□□□ -0.13
P06344 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
P06344 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
P06344 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P06344 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P06344 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
P06344 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P06344 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P06344 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
P06344 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.26□□□□□ -0.13
P06344 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.26□□□□□ -0.13
P06344 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P06344 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
P06344 Gm7461-201ENSMUST00000058918 827 ntBASIC14.26□□□□□ -0.13
P06344 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
P06344 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
P06344 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P06344 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
P06344 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.26□□□□□ -0.13
P06344 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P06344 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.26□□□□□ -0.13
P06344 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
P06344 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P06344 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
P06344 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P06344 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P06344 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P06344 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
P06344 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
P06344 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms