Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vti1aO89116 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vti1aO89116 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vti1aO89116 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vti1aO89116 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vti1aO89116 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vti1aO89116 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vti1aO89116 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.27■□□□□ 0.36
Vti1aO89116 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.27■□□□□ 0.36
Vti1aO89116 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vti1aO89116 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vti1aO89116 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vti1aO89116 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vti1aO89116 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vti1aO89116 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Vti1aO89116 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vti1aO89116 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vti1aO89116 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vti1aO89116 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Vti1aO89116 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vti1aO89116 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Vti1aO89116 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.26■□□□□ 0.35
Vti1aO89116 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.26■□□□□ 0.35
Vti1aO89116 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vti1aO89116 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vti1aO89116 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vti1aO89116 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vti1aO89116 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vti1aO89116 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vti1aO89116 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vti1aO89116 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vti1aO89116 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vti1aO89116 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vti1aO89116 Gm25745-201ENSMUST00000174945 133 ntBASIC17.26■□□□□ 0.35
Vti1aO89116 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.26■□□□□ 0.35
Vti1aO89116 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.26■□□□□ 0.35
Vti1aO89116 Gm27525-201ENSMUST00000184465 107 ntBASIC17.26■□□□□ 0.35
Vti1aO89116 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vti1aO89116 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.26■□□□□ 0.35
Vti1aO89116 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vti1aO89116 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vti1aO89116 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Vti1aO89116 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vti1aO89116 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vti1aO89116 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vti1aO89116 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vti1aO89116 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vti1aO89116 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.26■□□□□ 0.35
Vti1aO89116 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Vti1aO89116 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vti1aO89116 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Vti1aO89116 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Vti1aO89116 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vti1aO89116 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Vti1aO89116 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vti1aO89116 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vti1aO89116 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vti1aO89116 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
Vti1aO89116 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.25■□□□□ 0.35
Vti1aO89116 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Vti1aO89116 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vti1aO89116 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vti1aO89116 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vti1aO89116 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vti1aO89116 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vti1aO89116 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vti1aO89116 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vti1aO89116 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.24■□□□□ 0.35
Vti1aO89116 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vti1aO89116 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vti1aO89116 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.24■□□□□ 0.35
Vti1aO89116 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Vti1aO89116 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vti1aO89116 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vti1aO89116 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vti1aO89116 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vti1aO89116 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vti1aO89116 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vti1aO89116 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vti1aO89116 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vti1aO89116 Gm44357-201ENSMUST00000195897 142 ntBASIC17.24■□□□□ 0.35
Vti1aO89116 Gm19658-201ENSMUST00000196231 138 ntBASIC17.24■□□□□ 0.35
Vti1aO89116 Gm44367-201ENSMUST00000196836 138 ntBASIC17.24■□□□□ 0.35
Vti1aO89116 Gm44350-201ENSMUST00000197197 138 ntBASIC17.24■□□□□ 0.35
Vti1aO89116 Gm44390-201ENSMUST00000197533 144 ntBASIC17.24■□□□□ 0.35
Vti1aO89116 Gm44313-201ENSMUST00000198018 138 ntBASIC17.24■□□□□ 0.35
Vti1aO89116 Gm44486-201ENSMUST00000198508 138 ntBASIC17.24■□□□□ 0.35
Vti1aO89116 Gm44314-201ENSMUST00000199263 138 ntBASIC17.24■□□□□ 0.35
Vti1aO89116 Gm44394-201ENSMUST00000199558 138 ntBASIC17.24■□□□□ 0.35
Vti1aO89116 Gm44484-201ENSMUST00000199873 138 ntBASIC17.24■□□□□ 0.35
Vti1aO89116 Gm44466-201ENSMUST00000200264 138 ntBASIC17.24■□□□□ 0.35
Vti1aO89116 Gm44359-201ENSMUST00000200671 138 ntBASIC17.24■□□□□ 0.35
Vti1aO89116 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Vti1aO89116 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vti1aO89116 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.24■□□□□ 0.35
Vti1aO89116 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.24■□□□□ 0.35
Vti1aO89116 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vti1aO89116 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vti1aO89116 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vti1aO89116 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms