Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cops4O88544 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cops4O88544 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cops4O88544 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Cops4O88544 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cops4O88544 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cops4O88544 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cops4O88544 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Cops4O88544 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cops4O88544 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cops4O88544 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cops4O88544 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cops4O88544 Mir1199-201ENSMUST00000117015 119 ntBASIC14.85□□□□□ -0.03
Cops4O88544 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cops4O88544 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cops4O88544 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cops4O88544 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cops4O88544 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cops4O88544 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cops4O88544 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cops4O88544 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cops4O88544 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Cops4O88544 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cops4O88544 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cops4O88544 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cops4O88544 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.84□□□□□ -0.03
Cops4O88544 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.84□□□□□ -0.03
Cops4O88544 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cops4O88544 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cops4O88544 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.84□□□□□ -0.03
Cops4O88544 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cops4O88544 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cops4O88544 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cops4O88544 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Cops4O88544 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cops4O88544 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cops4O88544 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cops4O88544 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.84□□□□□ -0.03
Cops4O88544 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cops4O88544 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cops4O88544 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cops4O88544 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cops4O88544 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.84□□□□□ -0.03
Cops4O88544 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Cops4O88544 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cops4O88544 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Cops4O88544 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Cops4O88544 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cops4O88544 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cops4O88544 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cops4O88544 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cops4O88544 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.83□□□□□ -0.04
Cops4O88544 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cops4O88544 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cops4O88544 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Cops4O88544 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.83□□□□□ -0.04
Cops4O88544 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cops4O88544 Gm8520-201ENSMUST00000186517 868 ntBASIC14.83□□□□□ -0.04
Cops4O88544 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC14.83□□□□□ -0.04
Cops4O88544 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC14.83□□□□□ -0.04
Cops4O88544 Gm9731-201ENSMUST00000209480 747 ntBASIC14.83□□□□□ -0.04
Cops4O88544 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cops4O88544 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cops4O88544 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cops4O88544 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cops4O88544 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cops4O88544 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cops4O88544 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.83□□□□□ -0.04
Cops4O88544 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cops4O88544 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cops4O88544 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.83□□□□□ -0.04
Cops4O88544 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.83□□□□□ -0.04
Cops4O88544 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cops4O88544 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Cops4O88544 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cops4O88544 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.82□□□□□ -0.04
Cops4O88544 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cops4O88544 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cops4O88544 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cops4O88544 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cops4O88544 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cops4O88544 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cops4O88544 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cops4O88544 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Cops4O88544 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cops4O88544 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Cops4O88544 AC175538.1-201ENSMUST00000225343 1269 ntBASIC14.82□□□□□ -0.04
Cops4O88544 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.82□□□□□ -0.04
Cops4O88544 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cops4O88544 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Cops4O88544 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cops4O88544 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cops4O88544 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cops4O88544 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.82□□□□□ -0.04
Cops4O88544 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cops4O88544 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cops4O88544 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cops4O88544 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cops4O88544 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Cops4O88544 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms