Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.4□□□□□ -0.1
Cops3O88543 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cops3O88543 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cops3O88543 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cops3O88543 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cops3O88543 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cops3O88543 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cops3O88543 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cops3O88543 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cops3O88543 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cops3O88543 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cops3O88543 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cops3O88543 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cops3O88543 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cops3O88543 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Cops3O88543 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cops3O88543 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cops3O88543 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.11
Cops3O88543 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.4□□□□□ -0.11
Cops3O88543 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cops3O88543 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cops3O88543 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cops3O88543 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cops3O88543 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.39□□□□□ -0.11
Cops3O88543 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cops3O88543 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Cops3O88543 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cops3O88543 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cops3O88543 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cops3O88543 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cops3O88543 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cops3O88543 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.39□□□□□ -0.11
Cops3O88543 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cops3O88543 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cops3O88543 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cops3O88543 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.39□□□□□ -0.11
Cops3O88543 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cops3O88543 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cops3O88543 Gm10566-201ENSMUST00000086739 996 ntBASIC14.39□□□□□ -0.11
Cops3O88543 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cops3O88543 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.39□□□□□ -0.11
Cops3O88543 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cops3O88543 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cops3O88543 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cops3O88543 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Cops3O88543 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cops3O88543 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cops3O88543 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cops3O88543 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cops3O88543 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cops3O88543 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cops3O88543 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cops3O88543 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cops3O88543 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cops3O88543 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cops3O88543 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cops3O88543 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cops3O88543 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cops3O88543 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cops3O88543 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cops3O88543 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cops3O88543 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cops3O88543 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cops3O88543 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cops3O88543 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.38□□□□□ -0.11
Cops3O88543 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.38□□□□□ -0.11
Cops3O88543 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cops3O88543 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cops3O88543 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.38□□□□□ -0.11
Cops3O88543 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.38□□□□□ -0.11
Cops3O88543 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cops3O88543 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cops3O88543 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.38□□□□□ -0.11
Cops3O88543 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Cops3O88543 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cops3O88543 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cops3O88543 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cops3O88543 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cops3O88543 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.38□□□□□ -0.11
Cops3O88543 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cops3O88543 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Cops3O88543 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Cops3O88543 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.38□□□□□ -0.11
Cops3O88543 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.38□□□□□ -0.11
Cops3O88543 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.38□□□□□ -0.11
Cops3O88543 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cops3O88543 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cops3O88543 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cops3O88543 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cops3O88543 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops3O88543 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cops3O88543 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops3O88543 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.37□□□□□ -0.11
Cops3O88543 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cops3O88543 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cops3O88543 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cops3O88543 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops3O88543 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cops3O88543 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops3O88543 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms