Protein–RNA interactions for Protein: O88520

Shoc2, Leucine-rich repeat protein SHOC-2, mousemouse

Known RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shoc2O88520 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shoc2O88520 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Shoc2O88520 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Shoc2O88520 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Shoc2O88520 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Shoc2O88520 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shoc2O88520 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shoc2O88520 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shoc2O88520 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.61■□□□□ 0.25
Shoc2O88520 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shoc2O88520 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Shoc2O88520 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.61■□□□□ 0.25
Shoc2O88520 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shoc2O88520 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shoc2O88520 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shoc2O88520 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Shoc2O88520 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Shoc2O88520 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Shoc2O88520 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Shoc2O88520 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Shoc2O88520 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shoc2O88520 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shoc2O88520 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shoc2O88520 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.6■□□□□ 0.25
Shoc2O88520 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shoc2O88520 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Shoc2O88520 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.6■□□□□ 0.25
Shoc2O88520 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shoc2O88520 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.6■□□□□ 0.25
Shoc2O88520 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Shoc2O88520 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.6■□□□□ 0.25
Shoc2O88520 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shoc2O88520 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shoc2O88520 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shoc2O88520 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shoc2O88520 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shoc2O88520 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shoc2O88520 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Shoc2O88520 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shoc2O88520 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shoc2O88520 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shoc2O88520 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Shoc2O88520 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Shoc2O88520 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Shoc2O88520 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
Shoc2O88520 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shoc2O88520 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Shoc2O88520 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shoc2O88520 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Shoc2O88520 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shoc2O88520 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Shoc2O88520 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.59■□□□□ 0.25
Shoc2O88520 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Shoc2O88520 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.59■□□□□ 0.25
Shoc2O88520 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Shoc2O88520 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shoc2O88520 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shoc2O88520 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Shoc2O88520 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shoc2O88520 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.59■□□□□ 0.25
Shoc2O88520 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Shoc2O88520 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Shoc2O88520 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shoc2O88520 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Shoc2O88520 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shoc2O88520 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shoc2O88520 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.59■□□□□ 0.25
Shoc2O88520 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shoc2O88520 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shoc2O88520 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shoc2O88520 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Shoc2O88520 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Shoc2O88520 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Shoc2O88520 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.58■□□□□ 0.25
Shoc2O88520 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Shoc2O88520 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
Shoc2O88520 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Shoc2O88520 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.58■□□□□ 0.24
Shoc2O88520 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
Shoc2O88520 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Shoc2O88520 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Shoc2O88520 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Shoc2O88520 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Shoc2O88520 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Shoc2O88520 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.58■□□□□ 0.24
Shoc2O88520 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Shoc2O88520 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Shoc2O88520 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Shoc2O88520 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shoc2O88520 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shoc2O88520 Prob1-201ENSMUST00000097619 3021 ntBASIC16.57■□□□□ 0.24
Shoc2O88520 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Shoc2O88520 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shoc2O88520 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shoc2O88520 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shoc2O88520 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Shoc2O88520 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shoc2O88520 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shoc2O88520 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shoc2O88520 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms