Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SncaO55042 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SncaO55042 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.31□□□□□ -0.28
SncaO55042 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SncaO55042 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SncaO55042 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.31□□□□□ -0.28
SncaO55042 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC13.31□□□□□ -0.28
SncaO55042 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC13.31□□□□□ -0.28
SncaO55042 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SncaO55042 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SncaO55042 Gm21814-202ENSMUST00000203277 873 ntBASIC13.31□□□□□ -0.28
SncaO55042 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.31□□□□□ -0.28
SncaO55042 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
SncaO55042 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SncaO55042 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SncaO55042 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.31□□□□□ -0.28
SncaO55042 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SncaO55042 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SncaO55042 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SncaO55042 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SncaO55042 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SncaO55042 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SncaO55042 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SncaO55042 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SncaO55042 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SncaO55042 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC13.3□□□□□ -0.28
SncaO55042 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
SncaO55042 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SncaO55042 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SncaO55042 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.3□□□□□ -0.28
SncaO55042 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SncaO55042 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SncaO55042 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SncaO55042 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SncaO55042 Gm11539-201ENSMUST00000119837 557 ntBASIC13.3□□□□□ -0.28
SncaO55042 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
SncaO55042 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SncaO55042 Mir5122-201ENSMUST00000175004 89 ntBASIC13.3□□□□□ -0.28
SncaO55042 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC13.3□□□□□ -0.28
SncaO55042 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SncaO55042 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SncaO55042 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
SncaO55042 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
SncaO55042 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.3□□□□□ -0.28
SncaO55042 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
SncaO55042 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SncaO55042 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SncaO55042 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SncaO55042 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.3□□□□□ -0.28
SncaO55042 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SncaO55042 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SncaO55042 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SncaO55042 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SncaO55042 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SncaO55042 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SncaO55042 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SncaO55042 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SncaO55042 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SncaO55042 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SncaO55042 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SncaO55042 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
SncaO55042 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC13.29□□□□□ -0.28
SncaO55042 Gm22240-201ENSMUST00000175225 82 ntBASIC13.29□□□□□ -0.28
SncaO55042 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SncaO55042 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SncaO55042 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
SncaO55042 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SncaO55042 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SncaO55042 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
SncaO55042 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SncaO55042 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SncaO55042 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
SncaO55042 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SncaO55042 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SncaO55042 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SncaO55042 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SncaO55042 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.29□□□□□ -0.28
SncaO55042 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SncaO55042 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC13.28□□□□□ -0.28
SncaO55042 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.28□□□□□ -0.28
SncaO55042 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SncaO55042 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SncaO55042 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SncaO55042 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SncaO55042 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.28□□□□□ -0.28
SncaO55042 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SncaO55042 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
SncaO55042 Gm13474-201ENSMUST00000122466 815 ntBASIC13.28□□□□□ -0.28
SncaO55042 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SncaO55042 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SncaO55042 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.28□□□□□ -0.28
SncaO55042 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13.28□□□□□ -0.28
SncaO55042 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC13.28□□□□□ -0.28
SncaO55042 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SncaO55042 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC13.28□□□□□ -0.28
SncaO55042 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SncaO55042 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
SncaO55042 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SncaO55042 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
SncaO55042 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms