Protein–RNA interactions for Protein: O55029

Copb2, Coatomer subunit beta', mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb2O55029 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.4■□□□□ 0.54
Copb2O55029 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Copb2O55029 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.4■□□□□ 0.54
Copb2O55029 Gm8655-201ENSMUST00000221159 852 ntBASIC18.4■□□□□ 0.54
Copb2O55029 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Copb2O55029 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Copb2O55029 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Copb2O55029 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Copb2O55029 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
Copb2O55029 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.39■□□□□ 0.54
Copb2O55029 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Copb2O55029 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Copb2O55029 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Copb2O55029 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Copb2O55029 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Copb2O55029 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Copb2O55029 Gm11780-201ENSMUST00000136880 516 ntBASIC18.39■□□□□ 0.53
Copb2O55029 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC18.39■□□□□ 0.53
Copb2O55029 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Copb2O55029 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Copb2O55029 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Copb2O55029 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Copb2O55029 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Copb2O55029 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Copb2O55029 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Copb2O55029 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Copb2O55029 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.38■□□□□ 0.53
Copb2O55029 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Copb2O55029 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Copb2O55029 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Copb2O55029 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC18.38■□□□□ 0.53
Copb2O55029 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Copb2O55029 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Copb2O55029 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
Copb2O55029 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Copb2O55029 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.38■□□□□ 0.53
Copb2O55029 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Copb2O55029 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Copb2O55029 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.38■□□□□ 0.53
Copb2O55029 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Copb2O55029 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Copb2O55029 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Copb2O55029 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Copb2O55029 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Copb2O55029 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Copb2O55029 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Copb2O55029 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Copb2O55029 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Copb2O55029 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Copb2O55029 Gm1401-201ENSMUST00000122048 772 ntBASIC18.37■□□□□ 0.53
Copb2O55029 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC18.37■□□□□ 0.53
Copb2O55029 Gm7230-201ENSMUST00000173026 815 ntBASIC18.37■□□□□ 0.53
Copb2O55029 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC18.37■□□□□ 0.53
Copb2O55029 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC18.37■□□□□ 0.53
Copb2O55029 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Copb2O55029 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Copb2O55029 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Copb2O55029 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Copb2O55029 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Copb2O55029 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Copb2O55029 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
Copb2O55029 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Copb2O55029 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Copb2O55029 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Copb2O55029 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Copb2O55029 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Copb2O55029 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Copb2O55029 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Copb2O55029 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Copb2O55029 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Copb2O55029 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Copb2O55029 Gm13216-201ENSMUST00000117145 591 ntBASIC18.36■□□□□ 0.53
Copb2O55029 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Copb2O55029 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC18.36■□□□□ 0.53
Copb2O55029 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Copb2O55029 Mir5126-201ENSMUST00000175513 77 ntBASIC18.36■□□□□ 0.53
Copb2O55029 Gm6089-201ENSMUST00000197666 938 ntBASIC18.36■□□□□ 0.53
Copb2O55029 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Copb2O55029 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Copb2O55029 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Copb2O55029 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC18.36■□□□□ 0.53
Copb2O55029 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Copb2O55029 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Copb2O55029 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Copb2O55029 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.36■□□□□ 0.53
Copb2O55029 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Copb2O55029 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Copb2O55029 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Copb2O55029 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Copb2O55029 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Copb2O55029 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Copb2O55029 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Copb2O55029 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Copb2O55029 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC18.35■□□□□ 0.53
Copb2O55029 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Copb2O55029 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC18.35■□□□□ 0.53
Copb2O55029 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Copb2O55029 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC18.35■□□□□ 0.53
Copb2O55029 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.35■□□□□ 0.53
Copb2O55029 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms