Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Dkk1O54908 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.2□□□□□ -0.14
Dkk1O54908 1700039M10Rik-201ENSMUST00000180397 532 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Dkk1O54908 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.2□□□□□ -0.14
Dkk1O54908 Gm28826-201ENSMUST00000190006 488 ntTSL 2 BASIC14.2□□□□□ -0.14
Dkk1O54908 Gm18717-201ENSMUST00000192744 1241 ntBASIC14.2□□□□□ -0.14
Dkk1O54908 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Dkk1O54908 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.2□□□□□ -0.14
Dkk1O54908 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.2□□□□□ -0.14
Dkk1O54908 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Dkk1O54908 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.2□□□□□ -0.14
Dkk1O54908 AC158388.1-201ENSMUST00000225441 256 ntBASIC14.2□□□□□ -0.14
Dkk1O54908 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Dkk1O54908 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Dkk1O54908 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Dkk1O54908 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Dkk1O54908 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Dkk1O54908 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Dkk1O54908 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Dkk1O54908 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Dkk1O54908 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Dkk1O54908 AC140393.3-201ENSMUST00000228396 1352 ntBASIC14.2□□□□□ -0.14
Dkk1O54908 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Dkk1O54908 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC14.2□□□□□ -0.14
Dkk1O54908 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Dkk1O54908 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Dkk1O54908 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Dkk1O54908 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Dkk1O54908 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.19□□□□□ -0.14
Dkk1O54908 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Dkk1O54908 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Dkk1O54908 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Dkk1O54908 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Dkk1O54908 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Dkk1O54908 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Dkk1O54908 Defa-ps4-201ENSMUST00000118021 183 ntBASIC14.19□□□□□ -0.14
Dkk1O54908 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Dkk1O54908 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Dkk1O54908 Gm6345-202ENSMUST00000180900 204 ntBASIC14.19□□□□□ -0.14
Dkk1O54908 C030010L15Rik-201ENSMUST00000181465 715 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Dkk1O54908 Gm28455-201ENSMUST00000189105 1290 ntBASIC14.19□□□□□ -0.14
Dkk1O54908 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Dkk1O54908 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC14.19□□□□□ -0.14
Dkk1O54908 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.19□□□□□ -0.14
Dkk1O54908 AC154643.1-201ENSMUST00000225643 625 ntBASIC14.19□□□□□ -0.14
Dkk1O54908 Reg2-201ENSMUST00000023906 698 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Dkk1O54908 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Dkk1O54908 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Dkk1O54908 Krtap13-201ENSMUST00000053149 882 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Dkk1O54908 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Dkk1O54908 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Dkk1O54908 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Dkk1O54908 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Dkk1O54908 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Dkk1O54908 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Dkk1O54908 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Dkk1O54908 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dkk1O54908 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dkk1O54908 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dkk1O54908 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Dkk1O54908 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dkk1O54908 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dkk1O54908 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dkk1O54908 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.18□□□□□ -0.14
Dkk1O54908 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Dkk1O54908 Gm11835-201ENSMUST00000120635 663 ntBASIC14.18□□□□□ -0.14
Dkk1O54908 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dkk1O54908 AA414768-201ENSMUST00000121924 1257 ntBASIC14.18□□□□□ -0.14
Dkk1O54908 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.18□□□□□ -0.14
Dkk1O54908 4930599A14Rik-201ENSMUST00000186724 387 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Dkk1O54908 Gm20917-202ENSMUST00000188706 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dkk1O54908 Gm21394-202ENSMUST00000189463 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dkk1O54908 Gm20806-202ENSMUST00000190349 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dkk1O54908 Gm44559-201ENSMUST00000207177 1012 ntBASIC14.18□□□□□ -0.14
Dkk1O54908 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dkk1O54908 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Dkk1O54908 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dkk1O54908 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dkk1O54908 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dkk1O54908 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dkk1O54908 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dkk1O54908 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dkk1O54908 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.18□□□□□ -0.14
Dkk1O54908 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dkk1O54908 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dkk1O54908 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dkk1O54908 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dkk1O54908 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Dkk1O54908 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dkk1O54908 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Dkk1O54908 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dkk1O54908 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dkk1O54908 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Dkk1O54908 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dkk1O54908 Mir770-201ENSMUST00000103252 94 ntBASIC14.17□□□□□ -0.14
Dkk1O54908 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dkk1O54908 Gm13924-201ENSMUST00000119899 486 ntBASIC14.17□□□□□ -0.14
Dkk1O54908 Gm25016-201ENSMUST00000158399 131 ntBASIC14.17□□□□□ -0.14
Dkk1O54908 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.17□□□□□ -0.14
Dkk1O54908 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms