Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DffbO54788 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DffbO54788 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
DffbO54788 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DffbO54788 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
DffbO54788 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DffbO54788 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DffbO54788 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
DffbO54788 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.8□□□□□ -0.2
DffbO54788 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.8□□□□□ -0.2
DffbO54788 Gm11539-201ENSMUST00000119837 557 ntBASIC13.8□□□□□ -0.2
DffbO54788 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
DffbO54788 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC13.8□□□□□ -0.2
DffbO54788 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DffbO54788 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13.8□□□□□ -0.2
DffbO54788 Gm27463-201ENSMUST00000183569 57 ntBASIC13.8□□□□□ -0.2
DffbO54788 Gm44450-201ENSMUST00000199528 114 ntBASIC13.8□□□□□ -0.2
DffbO54788 Gm7370-201ENSMUST00000219471 767 ntBASIC13.8□□□□□ -0.2
DffbO54788 Gm18115-201ENSMUST00000221209 621 ntBASIC13.8□□□□□ -0.2
DffbO54788 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
DffbO54788 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DffbO54788 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DffbO54788 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.8□□□□□ -0.2
DffbO54788 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DffbO54788 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DffbO54788 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DffbO54788 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DffbO54788 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DffbO54788 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DffbO54788 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
DffbO54788 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DffbO54788 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DffbO54788 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DffbO54788 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.79□□□□□ -0.2
DffbO54788 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
DffbO54788 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
DffbO54788 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DffbO54788 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
DffbO54788 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
DffbO54788 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
DffbO54788 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC13.79□□□□□ -0.2
DffbO54788 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
DffbO54788 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC13.79□□□□□ -0.2
DffbO54788 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DffbO54788 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
DffbO54788 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DffbO54788 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
DffbO54788 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DffbO54788 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DffbO54788 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DffbO54788 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
DffbO54788 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
DffbO54788 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.79□□□□□ -0.2
DffbO54788 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
DffbO54788 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.79□□□□□ -0.2
DffbO54788 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
DffbO54788 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
DffbO54788 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
DffbO54788 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DffbO54788 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DffbO54788 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.78□□□□□ -0.2
DffbO54788 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
DffbO54788 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DffbO54788 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DffbO54788 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
DffbO54788 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
DffbO54788 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.78□□□□□ -0.2
DffbO54788 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DffbO54788 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC13.78□□□□□ -0.2
DffbO54788 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
DffbO54788 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DffbO54788 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
DffbO54788 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
DffbO54788 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
DffbO54788 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DffbO54788 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
DffbO54788 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
DffbO54788 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
DffbO54788 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
DffbO54788 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
DffbO54788 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DffbO54788 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.78□□□□□ -0.2
DffbO54788 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
DffbO54788 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.78□□□□□ -0.2
DffbO54788 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
DffbO54788 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DffbO54788 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DffbO54788 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
DffbO54788 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.78□□□□□ -0.2
DffbO54788 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DffbO54788 App-207ENSMUST00000227737 2827 ntBASIC13.77□□□□□ -0.2
DffbO54788 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
DffbO54788 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
DffbO54788 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.2
DffbO54788 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
DffbO54788 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
DffbO54788 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
DffbO54788 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DffbO54788 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
DffbO54788 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms