Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.26■□□□□ 0.19
Limk2O54785 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.26■□□□□ 0.19
Limk2O54785 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Limk2O54785 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Limk2O54785 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Limk2O54785 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Limk2O54785 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Limk2O54785 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Limk2O54785 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.26■□□□□ 0.19
Limk2O54785 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Limk2O54785 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Limk2O54785 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Limk2O54785 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Limk2O54785 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Limk2O54785 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Limk2O54785 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Limk2O54785 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Limk2O54785 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Limk2O54785 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Limk2O54785 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.25■□□□□ 0.19
Limk2O54785 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Limk2O54785 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Limk2O54785 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Limk2O54785 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Limk2O54785 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Limk2O54785 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Limk2O54785 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Limk2O54785 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
Limk2O54785 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.25■□□□□ 0.19
Limk2O54785 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Limk2O54785 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Limk2O54785 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.25■□□□□ 0.19
Limk2O54785 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Limk2O54785 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Limk2O54785 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Limk2O54785 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Limk2O54785 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Limk2O54785 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Limk2O54785 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Limk2O54785 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Limk2O54785 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.25■□□□□ 0.19
Limk2O54785 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Limk2O54785 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Limk2O54785 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Limk2O54785 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Limk2O54785 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Limk2O54785 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Limk2O54785 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Limk2O54785 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Limk2O54785 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Limk2O54785 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Limk2O54785 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.24■□□□□ 0.19
Limk2O54785 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.24■□□□□ 0.19
Limk2O54785 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.24■□□□□ 0.19
Limk2O54785 Mir6404-201ENSMUST00000183699 94 ntBASIC16.24■□□□□ 0.19
Limk2O54785 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.24■□□□□ 0.19
Limk2O54785 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.24■□□□□ 0.19
Limk2O54785 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Limk2O54785 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.24■□□□□ 0.19
Limk2O54785 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC16.24■□□□□ 0.19
Limk2O54785 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Limk2O54785 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Limk2O54785 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Limk2O54785 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Limk2O54785 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.24■□□□□ 0.19
Limk2O54785 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Limk2O54785 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Limk2O54785 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Limk2O54785 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Limk2O54785 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Limk2O54785 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Limk2O54785 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Limk2O54785 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Limk2O54785 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.24■□□□□ 0.19
Limk2O54785 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.24■□□□□ 0.19
Limk2O54785 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Limk2O54785 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Limk2O54785 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Limk2O54785 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Limk2O54785 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Limk2O54785 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Limk2O54785 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Limk2O54785 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Limk2O54785 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Limk2O54785 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.23■□□□□ 0.19
Limk2O54785 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Limk2O54785 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Limk2O54785 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.23■□□□□ 0.19
Limk2O54785 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Limk2O54785 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Limk2O54785 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
Limk2O54785 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Limk2O54785 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Limk2O54785 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.23■□□□□ 0.19
Limk2O54785 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.23■□□□□ 0.19
Limk2O54785 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Limk2O54785 Rprl3-201ENSMUST00000157400 290 ntBASIC16.23■□□□□ 0.19
Limk2O54785 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Limk2O54785 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.23■□□□□ 0.19
Limk2O54785 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms