Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Gm45453-201ENSMUST00000211758 853 ntBASIC17.27■□□□□ 0.36
Clcn6O35454 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Clcn6O35454 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Clcn6O35454 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Clcn6O35454 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Clcn6O35454 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Clcn6O35454 D030068K23Rik-203ENSMUST00000181098 1399 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Clcn6O35454 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Clcn6O35454 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Clcn6O35454 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clcn6O35454 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clcn6O35454 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Clcn6O35454 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Clcn6O35454 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clcn6O35454 Mir1199-201ENSMUST00000117015 119 ntBASIC17.26■□□□□ 0.35
Clcn6O35454 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Clcn6O35454 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clcn6O35454 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.26■□□□□ 0.35
Clcn6O35454 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clcn6O35454 Mir7071-201ENSMUST00000184847 69 ntBASIC17.26■□□□□ 0.35
Clcn6O35454 Gm17983-201ENSMUST00000190766 594 ntBASIC17.26■□□□□ 0.35
Clcn6O35454 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.26■□□□□ 0.35
Clcn6O35454 Gm38280-201ENSMUST00000192610 158 ntBASIC17.26■□□□□ 0.35
Clcn6O35454 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clcn6O35454 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clcn6O35454 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Clcn6O35454 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clcn6O35454 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Clcn6O35454 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clcn6O35454 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clcn6O35454 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clcn6O35454 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clcn6O35454 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clcn6O35454 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Clcn6O35454 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clcn6O35454 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clcn6O35454 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Clcn6O35454 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.25■□□□□ 0.35
Clcn6O35454 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn6O35454 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn6O35454 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Clcn6O35454 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn6O35454 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn6O35454 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn6O35454 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn6O35454 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn6O35454 Tcrg-V1-201ENSMUST00000103564 374 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Clcn6O35454 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn6O35454 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.25■□□□□ 0.35
Clcn6O35454 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn6O35454 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn6O35454 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.25■□□□□ 0.35
Clcn6O35454 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn6O35454 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn6O35454 Gm28722-201ENSMUST00000187630 1036 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn6O35454 Gm8190-201ENSMUST00000199603 586 ntBASIC17.25■□□□□ 0.35
Clcn6O35454 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Clcn6O35454 Gm44845-201ENSMUST00000208773 335 ntBASIC17.25■□□□□ 0.35
Clcn6O35454 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.25■□□□□ 0.35
Clcn6O35454 AC132104.1-201ENSMUST00000213615 260 ntBASIC17.25■□□□□ 0.35
Clcn6O35454 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.25■□□□□ 0.35
Clcn6O35454 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn6O35454 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn6O35454 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn6O35454 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn6O35454 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Clcn6O35454 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn6O35454 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn6O35454 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn6O35454 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn6O35454 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn6O35454 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clcn6O35454 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clcn6O35454 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clcn6O35454 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clcn6O35454 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clcn6O35454 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clcn6O35454 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clcn6O35454 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clcn6O35454 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clcn6O35454 Mir669l-201ENSMUST00000103771 98 ntBASIC17.24■□□□□ 0.35
Clcn6O35454 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clcn6O35454 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clcn6O35454 Gm715-201ENSMUST00000117865 831 ntBASIC17.24■□□□□ 0.35
Clcn6O35454 Gm14975-201ENSMUST00000118741 664 ntBASIC17.24■□□□□ 0.35
Clcn6O35454 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.24■□□□□ 0.35
Clcn6O35454 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clcn6O35454 Gm27861-201ENSMUST00000183920 214 ntBASIC17.24■□□□□ 0.35
Clcn6O35454 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clcn6O35454 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Clcn6O35454 Gm44548-201ENSMUST00000208929 192 ntBASIC17.24■□□□□ 0.35
Clcn6O35454 AC172027.1-201ENSMUST00000217659 337 ntBASIC17.24■□□□□ 0.35
Clcn6O35454 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Clcn6O35454 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clcn6O35454 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Clcn6O35454 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clcn6O35454 Gm26226-201ENSMUST00000082509 116 ntBASIC17.24■□□□□ 0.35
Clcn6O35454 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clcn6O35454 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clcn6O35454 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms