Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Polr1aO35134 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Polr1aO35134 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Polr1aO35134 Gm16198-201ENSMUST00000118766 670 ntBASIC24.49■■□□□ 1.51
Polr1aO35134 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC24.49■■□□□ 1.51
Polr1aO35134 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC24.49■■□□□ 1.51
Polr1aO35134 AA543401-201ENSMUST00000164248 1269 ntBASIC24.49■■□□□ 1.51
Polr1aO35134 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
Polr1aO35134 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Polr1aO35134 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Polr1aO35134 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Polr1aO35134 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Polr1aO35134 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Polr1aO35134 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC24.49■■□□□ 1.51
Polr1aO35134 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Polr1aO35134 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC24.49■■□□□ 1.51
Polr1aO35134 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Polr1aO35134 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Polr1aO35134 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC24.49■■□□□ 1.51
Polr1aO35134 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Polr1aO35134 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Polr1aO35134 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Polr1aO35134 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Polr1aO35134 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Polr1aO35134 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC24.48■■□□□ 1.51
Polr1aO35134 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC24.48■■□□□ 1.51
Polr1aO35134 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC24.48■■□□□ 1.51
Polr1aO35134 Gm20553-201ENSMUST00000204205 844 ntBASIC24.48■■□□□ 1.51
Polr1aO35134 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Polr1aO35134 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
Polr1aO35134 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Polr1aO35134 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Polr1aO35134 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
Polr1aO35134 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Polr1aO35134 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC24.47■■□□□ 1.51
Polr1aO35134 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC24.47■■□□□ 1.51
Polr1aO35134 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Polr1aO35134 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Polr1aO35134 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC24.47■■□□□ 1.51
Polr1aO35134 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Polr1aO35134 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
Polr1aO35134 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
Polr1aO35134 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Polr1aO35134 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Polr1aO35134 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Polr1aO35134 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC24.47■■□□□ 1.51
Polr1aO35134 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC24.47■■□□□ 1.51
Polr1aO35134 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
Polr1aO35134 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Polr1aO35134 Gm27321-201ENSMUST00000185021 205 ntBASIC24.47■■□□□ 1.51
Polr1aO35134 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Polr1aO35134 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Polr1aO35134 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Polr1aO35134 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Polr1aO35134 Wnt10b-206ENSMUST00000228546 2709 ntBASIC24.46■■□□□ 1.51
Polr1aO35134 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Polr1aO35134 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Polr1aO35134 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
Polr1aO35134 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Polr1aO35134 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC24.46■■□□□ 1.51
Polr1aO35134 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Polr1aO35134 Gm18889-201ENSMUST00000174284 929 ntBASIC24.46■■□□□ 1.51
Polr1aO35134 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
Polr1aO35134 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC24.46■■□□□ 1.51
Polr1aO35134 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Polr1aO35134 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Polr1aO35134 Prkcz2-201ENSMUST00000206136 1756 ntBASIC24.45■■□□□ 1.51
Polr1aO35134 Gm5184-201ENSMUST00000220417 1702 ntBASIC24.45■■□□□ 1.51
Polr1aO35134 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Polr1aO35134 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
Polr1aO35134 Gm5898-201ENSMUST00000121016 2071 ntBASIC24.45■■□□□ 1.5
Polr1aO35134 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC24.45■■□□□ 1.5
Polr1aO35134 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
Polr1aO35134 Gm22065-201ENSMUST00000103753 110 ntBASIC24.45■■□□□ 1.5
Polr1aO35134 Gm22066-201ENSMUST00000103761 110 ntBASIC24.45■■□□□ 1.5
Polr1aO35134 Gm24932-201ENSMUST00000103763 110 ntBASIC24.45■■□□□ 1.5
Polr1aO35134 Gm24115-201ENSMUST00000103799 110 ntBASIC24.45■■□□□ 1.5
Polr1aO35134 Gm22190-201ENSMUST00000103827 110 ntBASIC24.45■■□□□ 1.5
Polr1aO35134 Gm22191-201ENSMUST00000103831 110 ntBASIC24.45■■□□□ 1.5
Polr1aO35134 Gm24721-201ENSMUST00000103849 110 ntBASIC24.45■■□□□ 1.5
Polr1aO35134 Gm28018-201ENSMUST00000103869 110 ntBASIC24.45■■□□□ 1.5
Polr1aO35134 Gm26399-201ENSMUST00000103937 110 ntBASIC24.45■■□□□ 1.5
Polr1aO35134 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC24.45■■□□□ 1.5
Polr1aO35134 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Polr1aO35134 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Polr1aO35134 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Polr1aO35134 Gm25349-201ENSMUST00000177728 110 ntBASIC24.45■■□□□ 1.5
Polr1aO35134 Gm23616-201ENSMUST00000177797 110 ntBASIC24.45■■□□□ 1.5
Polr1aO35134 Gm25871-201ENSMUST00000177816 110 ntBASIC24.45■■□□□ 1.5
Polr1aO35134 Gm24752-201ENSMUST00000178240 110 ntBASIC24.45■■□□□ 1.5
Polr1aO35134 Gm24496-201ENSMUST00000178287 110 ntBASIC24.45■■□□□ 1.5
Polr1aO35134 Gm25649-201ENSMUST00000178476 110 ntBASIC24.45■■□□□ 1.5
Polr1aO35134 Gm25548-201ENSMUST00000178681 110 ntBASIC24.45■■□□□ 1.5
Polr1aO35134 Gm23147-201ENSMUST00000178841 110 ntBASIC24.45■■□□□ 1.5
Polr1aO35134 Gm26095-201ENSMUST00000179270 110 ntBASIC24.45■■□□□ 1.5
Polr1aO35134 Gm22171-201ENSMUST00000179283 110 ntBASIC24.45■■□□□ 1.5
Polr1aO35134 Gm23936-201ENSMUST00000179354 110 ntBASIC24.45■■□□□ 1.5
Polr1aO35134 Gm22619-201ENSMUST00000179516 110 ntBASIC24.45■■□□□ 1.5
Polr1aO35134 Gm25255-201ENSMUST00000179579 110 ntBASIC24.45■■□□□ 1.5
Polr1aO35134 Gm24755-201ENSMUST00000179691 110 ntBASIC24.45■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms