Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Hdac1O09106 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Hdac1O09106 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hdac1O09106 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hdac1O09106 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hdac1O09106 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hdac1O09106 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Hdac1O09106 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hdac1O09106 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC19.12■□□□□ 0.65
Hdac1O09106 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hdac1O09106 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hdac1O09106 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Hdac1O09106 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hdac1O09106 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Hdac1O09106 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hdac1O09106 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Hdac1O09106 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Hdac1O09106 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Hdac1O09106 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hdac1O09106 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hdac1O09106 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hdac1O09106 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hdac1O09106 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hdac1O09106 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hdac1O09106 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC19.11■□□□□ 0.65
Hdac1O09106 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hdac1O09106 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hdac1O09106 Gm10812-201ENSMUST00000099864 546 ntBASIC19.11■□□□□ 0.65
Hdac1O09106 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hdac1O09106 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
Hdac1O09106 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hdac1O09106 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.11■□□□□ 0.65
Hdac1O09106 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hdac1O09106 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Hdac1O09106 Gm9889-202ENSMUST00000206983 1577 ntBASIC19.1■□□□□ 0.65
Hdac1O09106 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Hdac1O09106 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hdac1O09106 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
Hdac1O09106 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC19.1■□□□□ 0.65
Hdac1O09106 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hdac1O09106 Gm27011-201ENSMUST00000182352 972 ntBASIC19.1■□□□□ 0.65
Hdac1O09106 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
Hdac1O09106 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hdac1O09106 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Hdac1O09106 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hdac1O09106 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC19.1■□□□□ 0.65
Hdac1O09106 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hdac1O09106 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Hdac1O09106 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hdac1O09106 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hdac1O09106 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Hdac1O09106 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Hdac1O09106 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hdac1O09106 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Hdac1O09106 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hdac1O09106 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hdac1O09106 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hdac1O09106 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hdac1O09106 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
Hdac1O09106 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Hdac1O09106 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hdac1O09106 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hdac1O09106 Gm22240-201ENSMUST00000175225 82 ntBASIC19.09■□□□□ 0.65
Hdac1O09106 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hdac1O09106 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hdac1O09106 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hdac1O09106 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hdac1O09106 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hdac1O09106 Gm10584-201ENSMUST00000207036 2628 ntBASIC19.09■□□□□ 0.65
Hdac1O09106 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hdac1O09106 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hdac1O09106 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Hdac1O09106 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Hdac1O09106 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Hdac1O09106 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Hdac1O09106 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC19.08■□□□□ 0.65
Hdac1O09106 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Hdac1O09106 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Hdac1O09106 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Hdac1O09106 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Hdac1O09106 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Hdac1O09106 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Hdac1O09106 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Hdac1O09106 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.08■□□□□ 0.64
Hdac1O09106 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Hdac1O09106 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hdac1O09106 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hdac1O09106 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hdac1O09106 Tfap2a-203ENSMUST00000223869 2037 ntBASIC19.08■□□□□ 0.64
Hdac1O09106 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hdac1O09106 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hdac1O09106 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Hdac1O09106 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.07■□□□□ 0.64
Hdac1O09106 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hdac1O09106 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hdac1O09106 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hdac1O09106 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC19.07■□□□□ 0.64
Hdac1O09106 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hdac1O09106 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Hdac1O09106 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms