Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ebf3O08791 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ebf3O08791 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ebf3O08791 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Ebf3O08791 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ebf3O08791 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ebf3O08791 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Ebf3O08791 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ebf3O08791 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ebf3O08791 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ebf3O08791 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ebf3O08791 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ebf3O08791 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ebf3O08791 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Ebf3O08791 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ebf3O08791 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ebf3O08791 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ebf3O08791 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ebf3O08791 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ebf3O08791 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Ebf3O08791 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ebf3O08791 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ebf3O08791 Gm12350-201ENSMUST00000121208 462 ntBASIC16.63■□□□□ 0.25
Ebf3O08791 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ebf3O08791 Gm37935-201ENSMUST00000192012 982 ntBASIC16.63■□□□□ 0.25
Ebf3O08791 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.63■□□□□ 0.25
Ebf3O08791 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.63■□□□□ 0.25
Ebf3O08791 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.63■□□□□ 0.25
Ebf3O08791 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ebf3O08791 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Ebf3O08791 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ebf3O08791 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Ebf3O08791 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ebf3O08791 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ebf3O08791 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ebf3O08791 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.63■□□□□ 0.25
Ebf3O08791 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Ebf3O08791 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Ebf3O08791 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ebf3O08791 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ebf3O08791 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Ebf3O08791 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.62■□□□□ 0.25
Ebf3O08791 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ebf3O08791 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ebf3O08791 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ebf3O08791 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Ebf3O08791 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ebf3O08791 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ebf3O08791 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ebf3O08791 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ebf3O08791 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ebf3O08791 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.62■□□□□ 0.25
Ebf3O08791 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ebf3O08791 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Ebf3O08791 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.62■□□□□ 0.25
Ebf3O08791 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.62■□□□□ 0.25
Ebf3O08791 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Ebf3O08791 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.62■□□□□ 0.25
Ebf3O08791 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.62■□□□□ 0.25
Ebf3O08791 Gm7506-201ENSMUST00000207758 815 ntBASIC16.62■□□□□ 0.25
Ebf3O08791 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.62■□□□□ 0.25
Ebf3O08791 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.62■□□□□ 0.25
Ebf3O08791 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.62■□□□□ 0.25
Ebf3O08791 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ebf3O08791 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ebf3O08791 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ebf3O08791 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Ebf3O08791 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ebf3O08791 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ebf3O08791 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ebf3O08791 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ebf3O08791 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.62■□□□□ 0.25
Ebf3O08791 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ebf3O08791 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Ebf3O08791 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ebf3O08791 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ebf3O08791 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.62■□□□□ 0.25
Ebf3O08791 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ebf3O08791 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ebf3O08791 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ebf3O08791 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Ebf3O08791 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ebf3O08791 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ebf3O08791 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.61■□□□□ 0.25
Ebf3O08791 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ebf3O08791 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.61■□□□□ 0.25
Ebf3O08791 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ebf3O08791 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Ebf3O08791 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ebf3O08791 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ebf3O08791 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.61■□□□□ 0.25
Ebf3O08791 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Ebf3O08791 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ebf3O08791 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Ebf3O08791 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ebf3O08791 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ebf3O08791 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ebf3O08791 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ebf3O08791 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ebf3O08791 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms