Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tnfrsf11bO08712 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tnfrsf11bO08712 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Tnfrsf11bO08712 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tnfrsf11bO08712 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.33■□□□□ 0.2
Tnfrsf11bO08712 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.33■□□□□ 0.2
Tnfrsf11bO08712 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.33■□□□□ 0.2
Tnfrsf11bO08712 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Tnfrsf11bO08712 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Tnfrsf11bO08712 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Tnfrsf11bO08712 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Tnfrsf11bO08712 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnfrsf11bO08712 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Tnfrsf11bO08712 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnfrsf11bO08712 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnfrsf11bO08712 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.32■□□□□ 0.2
Tnfrsf11bO08712 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.32■□□□□ 0.2
Tnfrsf11bO08712 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnfrsf11bO08712 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Tnfrsf11bO08712 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tnfrsf11bO08712 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tnfrsf11bO08712 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tnfrsf11bO08712 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Tnfrsf11bO08712 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tnfrsf11bO08712 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnfrsf11bO08712 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Tnfrsf11bO08712 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Tnfrsf11bO08712 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.32■□□□□ 0.2
Tnfrsf11bO08712 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnfrsf11bO08712 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.32■□□□□ 0.2
Tnfrsf11bO08712 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnfrsf11bO08712 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnfrsf11bO08712 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnfrsf11bO08712 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Tnfrsf11bO08712 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Tnfrsf11bO08712 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tnfrsf11bO08712 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnfrsf11bO08712 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Tnfrsf11bO08712 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfrsf11bO08712 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfrsf11bO08712 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfrsf11bO08712 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfrsf11bO08712 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Tnfrsf11bO08712 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.31■□□□□ 0.2
Tnfrsf11bO08712 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfrsf11bO08712 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfrsf11bO08712 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.31■□□□□ 0.2
Tnfrsf11bO08712 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfrsf11bO08712 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfrsf11bO08712 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Tnfrsf11bO08712 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Tnfrsf11bO08712 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.31■□□□□ 0.2
Tnfrsf11bO08712 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.31■□□□□ 0.2
Tnfrsf11bO08712 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.31■□□□□ 0.2
Tnfrsf11bO08712 Gm18032-201ENSMUST00000222541 538 ntBASIC16.31■□□□□ 0.2
Tnfrsf11bO08712 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfrsf11bO08712 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfrsf11bO08712 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfrsf11bO08712 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfrsf11bO08712 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfrsf11bO08712 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfrsf11bO08712 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Tnfrsf11bO08712 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfrsf11bO08712 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
Tnfrsf11bO08712 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Tnfrsf11bO08712 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Tnfrsf11bO08712 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfrsf11bO08712 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Tnfrsf11bO08712 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfrsf11bO08712 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.31■□□□□ 0.2
Tnfrsf11bO08712 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf11bO08712 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Tnfrsf11bO08712 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf11bO08712 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Tnfrsf11bO08712 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf11bO08712 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf11bO08712 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf11bO08712 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.3■□□□□ 0.2
Tnfrsf11bO08712 Gm10052-201ENSMUST00000168019 960 ntBASIC16.3■□□□□ 0.2
Tnfrsf11bO08712 Gm44430-201ENSMUST00000203376 995 ntBASIC16.3■□□□□ 0.2
Tnfrsf11bO08712 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf11bO08712 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf11bO08712 Gm7729-201ENSMUST00000050143 801 ntBASIC16.3■□□□□ 0.2
Tnfrsf11bO08712 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Tnfrsf11bO08712 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Tnfrsf11bO08712 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf11bO08712 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf11bO08712 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf11bO08712 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf11bO08712 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf11bO08712 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf11bO08712 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf11bO08712 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf11bO08712 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Tnfrsf11bO08712 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf11bO08712 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.29■□□□□ 0.2
Tnfrsf11bO08712 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Tnfrsf11bO08712 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfrsf11bO08712 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.29■□□□□ 0.2
Tnfrsf11bO08712 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms